ENSDARG00000026224


Danio rerio

Features
Gene ID: ENSDARG00000026224
  
Biological name :fanci
  
Synonyms : fanci / Fanconi anemia, complementation group I
  
Possible biological names infered from orthology : Fanconi anemia group I protein homolog / Q8K368 / Q9NVI1
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 8447565
Gene end: 8479171
  
Corresponding Affymetrix probe sets: Dr.2531.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116242
NCBI entrez gene - 324185     See in Manteia.
RefSeq - NM_001077312
RefSeq Peptide - NP_001070780
swissprot - F1R3B9
ZFIN ID - ZDB-GENE-030131-2905
Ensembl - ENSDARG00000026224
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FANCIENSGALG00000006658Gallus gallus
 FANCIENSG00000140525Homo sapiens
 FanciENSMUSG00000039187Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026171  Fanconi anemia group I protein
 IPR029305  FANCI solenoid 1 cap
 IPR029308  FANCI solenoid 1 domain
 IPR029310  FANCI helical domain 1
 IPR029312  FANCI helical domain 2
 IPR029313  FANCI solenoid 3 domain
 IPR029314  FANCI solenoid 4 domain
 IPR029315  FANCI solenoid 2 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0007095 mitotic G2 DNA damage checkpoint IBA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0070182 DNA polymerase binding IBA


Pathways (from Reactome)
Pathway description
Fanconi Anemia Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000003938 rpa1 / Q6NY74 / replication protein A1 / Q8VEE4* / P27694* / Replication protein A 70 kDa DNA-binding subunit *  / complex / reaction
 ENSDARG00000037188 rpa2 / replication protein A2 / RPA4* / Q13156* / P15927* / replication protein A4*  / complex / reaction
 ENSDARG00000053574 fancd2 / Fanconi anemia, complementation group D2 / Q80V62* / Q9BXW9* / Fanconi anemia group D2 protein homolog *  / complex / reaction
 ENSDARG00000038543 wdr48b / Q6PFM9 / WD repeat domain 48b / WDR48* / Q8TAF3* / Q8BH57* / WD repeat domain 48*  / reaction
 ENSDARG00000063076 atrip / ATR interacting protein / Q8BMG1* / Q8WXE1*  / reaction / complex






 

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