ENSDARG00000053574


Danio rerio

Features
Gene ID: ENSDARG00000053574
  
Biological name :fancd2
  
Synonyms : fancd2 / Fanconi anemia, complementation group D2
  
Possible biological names infered from orthology : Fanconi anemia group D2 protein homolog / Q80V62 / Q9BXW9
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 42291308
Gene end: 42336995
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000110669
Ensembl peptide - ENSDARP00000070083
NCBI entrez gene - 394241     See in Manteia.
RefSeq - NM_201341
RefSeq - XM_005166027
RefSeq - XM_021476818
RefSeq Peptide - NP_958498
swissprot - B3DJT4
ZFIN ID - ZDB-GENE-040116-5
Ensembl - ENSDARG00000053574
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FANCD2ENSGALG00000003720Gallus gallus
 FANCD2ENSG00000144554Homo sapiens
 Fancd2ENSMUSG00000034023Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR016024  Armadillo-type fold
 IPR023203  TTHA0068-like superfamily
 IPR029448  Fanconi anaemia protein FANCD2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0043066 negative regulation of apoptotic process IMP


Pathways (from Reactome)
Pathway description
Fanconi Anemia Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism viability , abnormal
whole organism morphology , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000003938 rpa1 / Q6NY74 / replication protein A1 / Q8VEE4* / P27694* / Replication protein A 70 kDa DNA-binding subunit *  / complex / reaction
 ENSDARG00000037188 rpa2 / replication protein A2 / RPA4* / Q13156* / P15927* / replication protein A4*  / reaction / complex
 ENSDARG00000026224 fanci / Fanconi anemia, complementation group I / Q8K368* / Q9NVI1* / Fanconi anemia group I protein homolog *  / reaction / complex
 ENSDARG00000038543 wdr48b / Q6PFM9 / WD repeat domain 48b / WDR48* / Q8TAF3* / Q8BH57* / WD repeat domain 48*  / reaction
 ENSDARG00000063076 atrip / ATR interacting protein / Q8BMG1* / Q8WXE1*  / reaction / complex






 

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