ENSGALG00000003720


Gallus gallus

Features
Gene ID: ENSGALG00000003720
  
Biological name :FANCD2
  
Synonyms : FANCD2 / Fanconi anemia complementation group D2
  
Possible biological names infered from orthology : Fanconi anemia group D2 protein homolog / Q80V62 / Q9BXW9
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 2737321
Gene end: 2782930
  
Corresponding Affymetrix probe sets: GgaAffx.2333.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050813
Ensembl peptide - ENSGALP00000005896
NCBI entrez gene - 415935     See in Manteia.
RefSeq - XM_015292828
RefSeq - NM_001039261
RefSeq Peptide - NP_001034350
swissprot - A0A1D5PDG8
swissprot - F1NP22
Ensembl - ENSGALG00000003720
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fancd2ENSDARG00000053574Danio rerio
 FANCD2ENSG00000144554Homo sapiens
 Fancd2ENSMUSG00000034023Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029448  Fanconi anaemia protein FANCD2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007129 synapsis IEA
 biological_processGO:0007276 gamete generation IEA
 biological_processGO:0010332 response to gamma radiation IEA
 biological_processGO:0034599 cellular response to oxidative stress IEA
 biological_processGO:0045589 regulation of regulatory T cell differentiation IEA
 biological_processGO:0048854 brain morphogenesis IEA
 biological_processGO:0050727 regulation of inflammatory response IEA
 biological_processGO:0051090 regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0097150 neuronal stem cell population maintenance IEA
 biological_processGO:2000348 regulation of CD40 signaling pathway IEA
 cellular_componentGO:0000793 condensed chromosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0070182 DNA polymerase binding IEA


Pathways (from Reactome)
Pathway description
Fanconi Anemia Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000000102 UBE2T / ubiquitin conjugating enzyme E2 T / Q9CQ37* / Q9NPD8*  / reaction / complex
 ENSGALG00000000734 RPA2 / RPA4* / Q13156* / P15927* / replication protein A2* / replication protein A4*  / complex / reaction
 ENSGALG00000002663 ATR / ATR serine/threonine kinase / Q13535*  / reaction / complex
 ENSGALG00000003072 RPA1 / Q5ZJJ2 / Replication protein A 70 kDa DNA-binding subunit / Q8VEE4* / P27694* / replication protein A1*  / reaction / complex
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / complex / reaction
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / complex / reaction
 ENSGALG00000006052 WDR48 / Q5F3K4 / WD repeat-containing protein 48 / Q8TAF3* / Q8BH57* / WD repeat domain 48*  / reaction
 ENSGALG00000010700 RPA3 / replication protein A3 / P35244* / Q9CQ71* / Replication protein A 14 kDa subunit *  / complex / reaction
 ENSGALG00000010957 USP1 / ubiquitin carboxyl-terminal hydrolase 1 / O94782* / Q8BJQ2* / ubiquitin specific peptidase 1*  / reaction






 

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