ENSGALG00000010957


Gallus gallus

Features
Gene ID: ENSGALG00000010957
  
Biological name :USP1
  
Synonyms : ubiquitin carboxyl-terminal hydrolase 1 / USP1
  
Possible biological names infered from orthology : O94782 / Q8BJQ2 / ubiquitin specific peptidase 1
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 27576542
Gene end: 27587094
  
Corresponding Affymetrix probe sets: GgaAffx.12597.1.S1_at (Chicken Array)   GgaAffx.6936.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045768
Ensembl peptide - ENSGALP00000017812
NCBI entrez gene - 424685     See in Manteia.
RefSeq - XM_015291024
RefSeq - NM_001031290
RefSeq Peptide - NP_001026461
swissprot - A0A1D5NZF0
swissprot - F1NPR3
Ensembl - ENSGALG00000010957
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp1ENSDARG00000056414Danio rerio
 USP1ENSG00000162607Homo sapiens
 Usp1ENSMUSG00000028560Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IEA
 biological_processGO:0006282 regulation of DNA repair IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0009411 response to UV IEA
 biological_processGO:0016579 protein deubiquitination IEA
 biological_processGO:0035520 monoubiquitinated protein deubiquitination IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0004197 cysteine-type endopeptidase activity IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Recognition of DNA damage by PCNA-containing replication complex
Fanconi Anemia Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000000734 RPA2 / RPA4* / Q13156* / P15927* / replication protein A2* / replication protein A4*  / complex / reaction
 ENSGALG00000003072 RPA1 / Q5ZJJ2 / Replication protein A 70 kDa DNA-binding subunit / Q8VEE4* / P27694* / replication protein A1*  / complex / reaction
 ENSGALG00000006052 WDR48 / Q5F3K4 / WD repeat-containing protein 48 / Q8TAF3* / Q8BH57* / WD repeat domain 48*  / complex
 ENSGALG00000010700 RPA3 / replication protein A3 / P35244* / Q9CQ71* / Replication protein A 14 kDa subunit *  / complex / reaction
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / reaction / complex
 ENSGALG00000003720 FANCD2 / Fanconi anemia complementation group D2 / Q80V62* / Q9BXW9* / Fanconi anemia group D2 protein homolog *  / reaction
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / reaction / complex
 ENSGALG00000029292 PCNA / Q9DEA3 / Proliferating cell nuclear antigen / P17918* / P12004* / Pcna-ps2*  / complex / reaction






 

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