ENSDARG00000026348


Danio rerio

Features
Gene ID: ENSDARG00000026348
  
Biological name :csad
  
Synonyms : csad / cysteine sulfinic acid decarboxylase
  
Possible biological names infered from orthology : Q9DBE0 / Q9Y600
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 36424768
Gene end: 36441693
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000024113
Ensembl peptide - ENSDARP00000147071
NCBI entrez gene - 492476     See in Manteia.
RefSeq - NM_001007348
RefSeq Peptide - NP_001007349
swissprot - F1QG14
swissprot - Q5U3I6
ZFIN ID - ZDB-GENE-041114-36
Ensembl - ENSDARG00000026348
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSADENSG00000139631Homo sapiens
 CsadENSMUSG00000023044Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gad1b / glutamate decarboxylase 1b / GAD1* / Q99259* / P48318* / glutamate decarboxylase 1*ENSDARG0000002741948
gad1a / glutamate decarboxylase 1a / GAD1* / Q99259* / P48318* / glutamate decarboxylase 1*ENSDARG0000009341147
zgc:163121ENSDARG0000005537047
gad2 / glutamate decarboxylase 2 / P48320* / Q05329* / glutamic acid decarboxylase 2*ENSDARG0000001553746
ddc / dopa decarboxylase / O88533* / P20711* / Aromatic-L-amino-acid decarboxylase *ENSDARG0000001649419
hdc / histidine decarboxylase / P19113* / P23738*ENSDARG0000007545418


Protein motifs (from Interpro)
Interpro ID Name
 IPR002129  Pyridoxal phosphate-dependent decarboxylase
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase
 IPR021115  Pyridoxal-phosphate binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007507 heart development IMP
 biological_processGO:0019752 carboxylic acid metabolic process IEA
 biological_processGO:0042412 taurine biosynthetic process IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0016831 carboxy-lyase activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000360 heart tube heart tube malformed , abnormal
Show

 ZFA:0001094 whole organism whole organism dead , abnormal
whole organism taurine decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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