ENSMUSG00000023044


Mus musculus

Features
Gene ID: ENSMUSG00000023044
  
Biological name :Csad
  
Synonyms : Csad / Cysteine sulfinic acid decarboxylase / Q9DBE0
  
Possible biological names infered from orthology : Q9Y600
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: F2
Gene start: 102176999
Gene end: 102204724
  
Corresponding Affymetrix probe sets: 10432939 (MoGene1.0st)   1427981_a_at (Mouse Genome 430 2.0 Array)   1448986_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000155756
Ensembl peptide - ENSMUSP00000023805
Ensembl peptide - ENSMUSP00000154991
Ensembl peptide - ENSMUSP00000155067
Ensembl peptide - ENSMUSP00000155075
Ensembl peptide - ENSMUSP00000155153
Ensembl peptide - ENSMUSP00000155192
Ensembl peptide - ENSMUSP00000155265
Ensembl peptide - ENSMUSP00000155282
Ensembl peptide - ENSMUSP00000155394
Ensembl peptide - ENSMUSP00000155492
Ensembl peptide - ENSMUSP00000155509
Ensembl peptide - ENSMUSP00000155558
Ensembl peptide - ENSMUSP00000155560
Ensembl peptide - ENSMUSP00000155633
Ensembl peptide - ENSMUSP00000155645
Ensembl peptide - ENSMUSP00000155715
NCBI entrez gene - 246277     See in Manteia.
MGI - MGI:2180098
RefSeq - XM_017316620
RefSeq - XM_017316618
RefSeq - XM_017316619
RefSeq - NM_144942
RefSeq - XM_006520999
RefSeq - XM_011245638
RefSeq - XM_011245642
RefSeq - XM_011245643
RefSeq - XM_017316612
RefSeq - XM_017316613
RefSeq - XM_017316614
RefSeq - XM_017316615
RefSeq - XM_017316616
RefSeq - XM_017316617
RefSeq Peptide - NP_001346055
RefSeq Peptide - NP_659191
swissprot - Q9DBE0
Ensembl - ENSMUSG00000023044
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 csadENSDARG00000026348Danio rerio
 CSADENSG00000139631Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gadl1 / glutamate decarboxylase like 1 / Q6ZQY3*ENSMUSG0000005688061
Gad2 / P48320 / glutamic acid decarboxylase 2 / Q05329* / glutamate decarboxylase 2*ENSMUSG0000002678753
Gad1 / P48318 / glutamate decarboxylase 1 / Q99259*ENSMUSG0000007088052
Ddc / O88533 / Aromatic-L-amino-acid decarboxylase / P20711* / dopa decarboxylase*ENSMUSG0000002018222
Hdc / P23738 / histidine decarboxylase / P19113*ENSMUSG0000002736021


Protein motifs (from Interpro)
Interpro ID Name
 IPR002129  Pyridoxal phosphate-dependent decarboxylase
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase
 IPR021115  Pyridoxal-phosphate binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019452 L-cysteine catabolic process to taurine TAS
 biological_processGO:0019530 taurine metabolic process TAS
 biological_processGO:0019752 carboxylic acid metabolic process IEA
 biological_processGO:0042412 taurine biosynthetic process IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004782 sulfinoalanine decarboxylase activity IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0016831 carboxy-lyase activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011088 partial neonatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms within the neonatal period after birth (Mus: P0)" [MGI:csmith]
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Allelic Composition: Esrp1tm1.2Rpc/Esrp1tm1.2Rpc,Esrp2tm1(KOMP)Vlcg/Esrp2tm1(KOMP)Vlcg
Genetic Background: involves: 129S4/SvJae * C57BL/6 * C57BL/6J * C57BL/6NTac

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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