ENSMUSG00000056880


Mus musculus

Features
Gene ID: ENSMUSG00000056880
  
Biological name :Gadl1
  
Synonyms : Gadl1 / glutamate decarboxylase like 1
  
Possible biological names infered from orthology : Q6ZQY3
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: F3
Gene start: 115909455
Gene end: 116076176
  
Corresponding Affymetrix probe sets: 10589960 (MoGene1.0st)   1430843_at (Mouse Genome 430 2.0 Array)   1441384_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000112433
Ensembl peptide - ENSMUSP00000113240
Ensembl peptide - ENSMUSP00000077694
NCBI entrez gene - 73748     See in Manteia.
MGI - MGI:1920998
RefSeq - XM_006512319
RefSeq - XM_017313628
RefSeq - NM_028638
RefSeq - XM_017313627
RefSeq Peptide - NP_082914
swissprot - E9QP13
swissprot - D3YWS5
Ensembl - ENSMUSG00000056880
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GADL1ENSGALG00000011447Gallus gallus
 GADL1ENSG00000144644Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Csad / Q9DBE0 / Cysteine sulfinic acid decarboxylase / Q9Y600*ENSMUSG0000002304460
Gad1 / P48318 / glutamate decarboxylase 1 / Q99259*ENSMUSG0000007088050
Gad2 / P48320 / glutamic acid decarboxylase 2 / Q05329* / glutamate decarboxylase 2*ENSMUSG0000002678747
Hdc / P23738 / histidine decarboxylase / P19113*ENSMUSG0000002736024
Ddc / O88533 / Aromatic-L-amino-acid decarboxylase / P20711* / dopa decarboxylase*ENSMUSG0000002018223


Protein motifs (from Interpro)
Interpro ID Name
 IPR002129  Pyridoxal phosphate-dependent decarboxylase
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase
 IPR021115  Pyridoxal-phosphate binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019752 carboxylic acid metabolic process IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0016831 carboxy-lyase activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA


Pathways (from Reactome)
Pathway description
Degradation of cysteine and homocysteine
Amino acid synthesis and interconversion (transamination)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr