ENSDARG00000026531


Danio rerio

Features
Gene ID: ENSDARG00000026531
  
Biological name :alcama
  
Synonyms : activated leukocyte cell adhesion molecule a / alcama
  
Possible biological names infered from orthology : activated leukocyte cell adhesion molecule / ALCAM / CD166 antigen / Q13740 / Q61490
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 28731749
Gene end: 28835812
  
Corresponding Affymetrix probe sets: Dr.20912.1.S1_at (Zebrafish Array)   Dr.20912.1.S2_at (Zebrafish Array)   Dr.906.1.S1_at (Zebrafish Array)   NM_131000_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000109779
Ensembl peptide - ENSDARP00000144664
Ensembl peptide - ENSDARP00000152888
NCBI entrez gene - 30194     See in Manteia.
RefSeq - NM_131000
RefSeq Peptide - NP_571075
swissprot - F1QD88
ZFIN ID - ZDB-GENE-990415-30
Ensembl - ENSDARG00000026531
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ALCAMENSGALG00000015348Gallus gallus
 ALCAMENSG00000170017Homo sapiens
 AlcamENSMUSG00000022636Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
alcamb / activated leukocyte cell adhesion molecule b / ALCAM* / Q13740* / Q61490* / CD166 antigen * / activated leukocyte cell adhesion molecule*ENSDARG0000005853843
bcam / basal cell adhesion molecule (Lutheran blood group) / P50895* / Q9R069* / Basal cell adhesion molecule *ENSDARG0000009019022
mcamb / melanoma cell adhesion molecule b / MCAM* / P43121* / Q8R2Y2* / melanoma cell adhesion molecule* / Cell surface glycoprotein MUC18 *ENSDARG0000000536821
mcama / melanoma cell adhesion molecule a / MCAM* / P43121* / Q8R2Y2* / melanoma cell adhesion molecule* / Cell surface glycoprotein MUC18 *ENSDARG0000008964321


Protein motifs (from Interpro)
Interpro ID Name
 IPR003006  Immunoglobulin/major histocompatibility complex, conserved site
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013162  CD80-like, immunoglobulin C2-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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