ENSDARG00000058538


Danio rerio

Features
Gene ID: ENSDARG00000058538
  
Biological name :alcamb
  
Synonyms : activated leukocyte cell adhesion molecule b / alcamb
  
Possible biological names infered from orthology : activated leukocyte cell adhesion molecule / ALCAM / CD166 antigen / Q13740 / Q61490
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 19838458
Gene end: 19878987
  
Corresponding Affymetrix probe sets: Dr.25316.1.S1_at (Zebrafish Array)   NM_212634_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000091978
NCBI entrez gene - 323919     See in Manteia.
RefSeq - NM_212634
RefSeq Peptide - NP_997799
swissprot - F1QE54
ZFIN ID - ZDB-GENE-030131-1768
Ensembl - ENSDARG00000058538
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ALCAMENSGALG00000015348Gallus gallus
 ALCAMENSG00000170017Homo sapiens
 AlcamENSMUSG00000022636Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
alcama / activated leukocyte cell adhesion molecule a / ALCAM* / Q13740* / Q61490* / CD166 antigen * / activated leukocyte cell adhesion molecule*ENSDARG0000002653143
bcam / basal cell adhesion molecule (Lutheran blood group) / P50895* / Q9R069* / Basal cell adhesion molecule *ENSDARG0000009019024
mcamb / melanoma cell adhesion molecule b / MCAM* / P43121* / Q8R2Y2* / melanoma cell adhesion molecule* / Cell surface glycoprotein MUC18 *ENSDARG0000000536824
mcama / melanoma cell adhesion molecule a / MCAM* / P43121* / Q8R2Y2* / melanoma cell adhesion molecule* / Cell surface glycoprotein MUC18 *ENSDARG0000008964321


Protein motifs (from Interpro)
Interpro ID Name
 IPR003006  Immunoglobulin/major histocompatibility complex, conserved site
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013162  CD80-like, immunoglobulin C2-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0021885 forebrain cell migration IMP
 biological_processGO:0031290 retinal ganglion cell axon guidance IMP
 biological_processGO:0060385 axonogenesis involved in innervation IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030424 axon IDA
 molecular_functionGO:0042802 identical protein binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0007026 forebrain neural keel forebrain neural keel physical object quality , abnormal
Show

 ZFA:0009310 retinal ganglion cell retinal ganglion cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr