ENSDARG00000031198


Danio rerio

Features
Gene ID: ENSDARG00000031198
  
Biological name :hmg20a
  
Synonyms : high mobility group 20A / hmg20a
  
Possible biological names infered from orthology : High mobility group protein 20A / Q9DC33 / Q9NP66
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 7241084
Gene end: 7336346
  
Corresponding Affymetrix probe sets: Dr.7178.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000147000
Ensembl peptide - ENSDARP00000157579
Ensembl peptide - ENSDARP00000148449
Ensembl peptide - ENSDARP00000095483
Ensembl peptide - ENSDARP00000119454
NCBI entrez gene - 326908     See in Manteia.
RefSeq - NM_001089334
RefSeq - XM_005174266
RefSeq Peptide - NP_001082803
swissprot - E9QEX0
swissprot - A3KNQ1
ZFIN ID - ZDB-GENE-030131-5107
Ensembl - ENSDARG00000031198
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HMG20AENSGALG00000041641Gallus gallus
 HMG20AENSG00000140382Homo sapiens
 Hmg20aENSMUSG00000032329Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hmg20b / high mobility group 20B / Q9P0W2* / Q9Z104*ENSDARG0000004204544


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr