ENSGALG00000041641


Gallus gallus

Features
Gene ID: ENSGALG00000041641
  
Biological name :HMG20A
  
Synonyms : high mobility group protein 20A / HMG20A
  
Possible biological names infered from orthology : high mobility group 20A / Q9DC33 / Q9NP66
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 2892641
Gene end: 2929860
  
Corresponding Affymetrix probe sets: Gga.15892.1.S1_at (Chicken Array)   Gga.16791.1.S1_s_at (Chicken Array)   GgaAffx.12233.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053537
NCBI entrez gene - 415346     See in Manteia.
RefSeq - XM_015278873
RefSeq - NM_001030394
RefSeq - XM_015278870
RefSeq - XM_015278871
RefSeq - XM_015278869
RefSeq Peptide - NP_001025565
swissprot - A0A1D5PL23
Ensembl - ENSGALG00000041641
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hmg20aENSDARG00000031198Danio rerio
 HMG20AENSG00000140382Homo sapiens
 Hmg20aENSMUSG00000032329Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HMG20B / high mobility group 20B / Q9P0W2* / Q9Z104*ENSGALG0000002783843


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0033234 negative regulation of protein sumoylation IEA
 biological_processGO:0045665 negative regulation of neuron differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr