ENSMUSG00000032329


Mus musculus

Features
Gene ID: ENSMUSG00000032329
  
Biological name :Hmg20a
  
Synonyms : High mobility group protein 20A / Hmg20a / Q9DC33
  
Possible biological names infered from orthology : high mobility group 20A / Q9NP66
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: B
Gene start: 56418609
Gene end: 56496936
  
Corresponding Affymetrix probe sets: 10585572 (MoGene1.0st)   1416722_at (Mouse Genome 430 2.0 Array)   1428920_at (Mouse Genome 430 2.0 Array)   1442683_at (Mouse Genome 430 2.0 Array)   1442684_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000149698
Ensembl peptide - ENSMUSP00000150382
Ensembl peptide - ENSMUSP00000149934
Ensembl peptide - ENSMUSP00000034879
Ensembl peptide - ENSMUSP00000149359
Ensembl peptide - ENSMUSP00000149375
NCBI entrez gene - 66867     See in Manteia.
MGI - MGI:1914117
RefSeq - NM_025812
RefSeq - XM_006511368
RefSeq Peptide - NP_080088
swissprot - A0A1L1SSI9
swissprot - Q9DC33
swissprot - A0A1L1SRA5
Ensembl - ENSMUSG00000032329
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hmg20aENSDARG00000031198Danio rerio
 HMG20AENSGALG00000041641Gallus gallus
 HMG20AENSG00000140382Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Hmg20b / Q9Z104 / high mobility group 20B / Q9P0W2*ENSMUSG0000002023244


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain
 IPR036910  High mobility group box domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0033234 negative regulation of protein sumoylation IMP
 biological_processGO:0045665 negative regulation of neuron differentiation IGI
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0042802 identical protein binding ISO
 molecular_functionGO:0046982 protein heterodimerization activity IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr