ENSGALG00000027838


Gallus gallus

Features
Gene ID: ENSGALG00000027838
  
Biological name :HMG20B
  
Synonyms : high mobility group 20B / HMG20B
  
Possible biological names infered from orthology : Q9P0W2 / Q9Z104
  
Species: Gallus gallus
  
Chr. number: 28
Strand: -1
Band:
Gene start: 1040737
Gene end: 1045520
  
Corresponding Affymetrix probe sets: Gga.1207.1.S1_at (Chicken Array)   Gga.1207.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058605
Ensembl peptide - ENSGALP00000041227
NCBI entrez gene - 426515     See in Manteia.
RefSeq - XM_015299779
RefSeq - XM_015299777
RefSeq - XM_015299778
swissprot - R4GGQ7
swissprot - A0A1L1RIN2
Ensembl - ENSGALG00000027838
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hmg20bENSDARG00000042045Danio rerio
 HMG20BENSG00000064961Homo sapiens
 Hmg20bENSMUSG00000020232Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HMG20A / high mobility group protein 20A / Q9DC33* / Q9NP66* / high mobility group 20A*ENSGALG0000004164147


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0033234 negative regulation of protein sumoylation IEA
 biological_processGO:0035914 skeletal muscle cell differentiation IEA
 biological_processGO:0045666 positive regulation of neuron differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
Factors involved in megakaryocyte development and platelet production


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr