ENSG00000064961


Homo sapiens

Features
Gene ID: ENSG00000064961
  
Biological name :HMG20B
  
Synonyms : high mobility group 20B / HMG20B / Q9P0W2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: p13.3
Gene start: 3572777
Gene end: 3579088
  
Corresponding Affymetrix probe sets: 209113_s_at (Human Genome U133 Plus 2.0 Array)   210719_s_at (Human Genome U133 Plus 2.0 Array)   213966_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000328269
Ensembl peptide - ENSP00000465293
Ensembl peptide - ENSP00000410924
Ensembl peptide - ENSP00000402877
Ensembl peptide - ENSP00000393904
Ensembl peptide - ENSP00000393481
Ensembl peptide - ENSP00000262949
NCBI entrez gene - 10362     See in Manteia.
OMIM - 605535
RefSeq - NM_006339
RefSeq - XM_017026144
RefSeq Peptide - NP_006330
swissprot - C9K049
swissprot - K7EJR8
swissprot - Q9P0W2
swissprot - F8WES5
swissprot - C9JQA7
swissprot - C9J8X5
swissprot - B5MDG7
Ensembl - ENSG00000064961
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hmg20bENSDARG00000042045Danio rerio
 HMG20BENSGALG00000027838Gallus gallus
 Hmg20bENSMUSG00000020232Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HMG20A / Q9NP66 / high mobility group 20AENSG0000014038248


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain
 IPR036910  High mobility group box domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007596 blood coagulation TAS
 biological_processGO:0016575 histone deacetylation IEA
 biological_processGO:0033234 negative regulation of protein sumoylation IEA
 biological_processGO:0035914 skeletal muscle cell differentiation IEA
 biological_processGO:0045666 positive regulation of neuron differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0016604 nuclear body IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004407 histone deacetylase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
HDACs deacetylate histones
Factors involved in megakaryocyte development and platelet production


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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