ENSDARG00000042045


Danio rerio

Features
Gene ID: ENSDARG00000042045
  
Biological name :hmg20b
  
Synonyms : high mobility group 20B / hmg20b
  
Possible biological names infered from orthology : Q9P0W2 / Q9Z104
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 20169352
Gene end: 20181597
  
Corresponding Affymetrix probe sets: Dr.2795.1.A1_at (Zebrafish Array)   NM_001020551_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000146990
Ensembl peptide - ENSDARP00000061616
Ensembl peptide - ENSDARP00000139903
NCBI entrez gene - 553572     See in Manteia.
RefSeq - NM_001020551
RefSeq - NM_001045228
RefSeq Peptide - NP_001018387
RefSeq Peptide - NP_001038693
swissprot - Q503Z1
swissprot - A0A0R4IWQ8
ZFIN ID - ZDB-GENE-030131-4258
Ensembl - ENSDARG00000042045
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HMG20BENSGALG00000027838Gallus gallus
 HMG20BENSG00000064961Homo sapiens
 Hmg20bENSMUSG00000020232Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hmg20a / high mobility group 20A / Q9DC33* / Q9NP66* / High mobility group protein 20A *ENSDARG0000003119843


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
Factors involved in megakaryocyte development and platelet production


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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