ENSDARG00000031757


Danio rerio

Features
Gene ID: ENSDARG00000031757
  
Biological name :tmc4
  
Synonyms : tmc4 / transmembrane channel-like 4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 32029090
Gene end: 32050153
  
Corresponding Affymetrix probe sets: Dr.2871.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000041053
NCBI entrez gene - 100333974     See in Manteia.
RefSeq - XM_002664937
swissprot - E7F4Y3
ZFIN ID - ZDB-GENE-030131-7489
Ensembl - ENSDARG00000031757
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMC4ENSG00000167608Homo sapiens
 Tmc4ENSMUSG00000019734Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmc8 / transmembrane channel-like 8 / Q7TN58* / Q8IU68* / Transmembrane channel-like protein 8 *ENSDARG0000010105027
tmc6a / transmembrane channel-like 6a / TMC6* / Q7Z403* / transmembrane channel like 6*ENSDARG0000006978723
si:dkey-202l16.5 / TMC5* / Q6UXY8* / Q32NZ6* / transmembrane channel like 5* / Transmembrane channel-like protein 5 *ENSDARG0000001325222
tmc2a / E7FFT2 / transmembrane channel-like 2a / TMC2* / Q8TDI7* / Q8R4P4* / transmembrane channel like 2* / Transmembrane channel-like protein 2 *ENSDARG0000003310420
tmc1 / F1QFU0 / transmembrane channel-like 1 / Q8TDI8* / Q8R4P5* / Transmembrane channel-like protein 1 *ENSDARG0000005638620
tmc2b / F1QZE9 / transmembrane channel-like 2b / TMC2* / Q8TDI7* / Q8R4P4* / transmembrane channel like 2* / Transmembrane channel-like protein 2 *ENSDARG0000003031120
si:dkey-15b23.3 / TMC3* / Q7Z5M5* / transmembrane channel like 3*ENSDARG000000906966


Protein motifs (from Interpro)
Interpro ID Name
 IPR012496  TMC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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