ENSDARG00000069787


Danio rerio

Features
Gene ID: ENSDARG00000069787
  
Biological name :tmc6a
  
Synonyms : tmc6a / transmembrane channel-like 6a
  
Possible biological names infered from orthology : Q7TN60 / Q7Z403 / TMC6 / transmembrane channel like 6 / transmembrane channel-like gene family 6
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 57779673
Gene end: 57816877
  
Corresponding Affymetrix probe sets: Dr.16491.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000092615
Ensembl peptide - ENSDARP00000124750
swissprot - F1Q6K2
swissprot - F8W2F3
ZFIN ID - ZDB-GENE-081114-3
Ensembl - ENSDARG00000069787
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMC6ENSGALG00000038875Gallus gallus
 TMC6ENSG00000141524Homo sapiens
 Tmc6ENSMUSG00000025572Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-202l16.5 / TMC5* / Q6UXY8* / Q32NZ6* / transmembrane channel like 5* / Transmembrane channel-like protein 5 *ENSDARG0000001325226
tmc4 / transmembrane channel-like 4ENSDARG0000003175721
tmc1 / F1QFU0 / transmembrane channel-like 1 / Q8TDI8* / Q8R4P5* / Transmembrane channel-like protein 1 *ENSDARG0000005638619
tmc8 / transmembrane channel-like 8 / Q7TN58* / Q8IU68* / Transmembrane channel-like protein 8 *ENSDARG0000010105018
tmc2b / F1QZE9 / transmembrane channel-like 2b / TMC2* / Q8TDI7* / Q8R4P4* / transmembrane channel like 2* / Transmembrane channel-like protein 2 *ENSDARG0000003031117
tmc2a / E7FFT2 / transmembrane channel-like 2a / TMC2* / Q8TDI7* / Q8R4P4* / transmembrane channel like 2* / Transmembrane channel-like protein 2 *ENSDARG0000003310417
si:dkey-15b23.3 / TMC3* / Q7Z5M5* / transmembrane channel like 3*ENSDARG000000906965


Protein motifs (from Interpro)
Interpro ID Name
 IPR012496  TMC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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