ENSDARG00000032865


Danio rerio

Features
Gene ID: ENSDARG00000032865
  
Biological name :pacsin1a
  
Synonyms : pacsin1a / protein kinase C and casein kinase substrate in neurons 1a
  
Possible biological names infered from orthology : PACSIN1 / protein kinase C and casein kinase substrate in neurons 1 / Protein kinase C and casein kinase substrate in neurons protein 1 / Q61644 / Q9BY11
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 3653386
Gene end: 3703569
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113630
Ensembl peptide - ENSDARP00000148261
Ensembl peptide - ENSDARP00000114722
Ensembl peptide - ENSDARP00000040085
Ensembl peptide - ENSDARP00000057421
NCBI entrez gene - 553559     See in Manteia.
RefSeq - NM_001328357
RefSeq Peptide - NP_001315286
swissprot - E9QIQ6
swissprot - E7FD14
swissprot - F1QZW0
ZFIN ID - ZDB-GENE-050522-155
Ensembl - ENSDARG00000032865
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PACSIN1ENSGALG00000002802Gallus gallus
 Q9BY11ENSG00000124507Homo sapiens
 Q61644ENSMUSG00000040276Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q4V920 / pacsin1b / protein kinase C and casein kinase substrate in neurons 1b / Q61644* / Q9BY11* / PACSIN1* / protein kinase C and casein kinase substrate in neurons 1* / Protein kinase C...ENSDARG0000004212876
pacsin2 / protein kinase C and casein kinase substrate in neurons 2 / Q9UNF0* / Q9WVE8*ENSDARG0000007801458
pacsin3 / protein kinase C and casein kinase substrate in neurons 3 / Q99JB8* / Q9UKS6* / Protein kinase C and casein kinase II substrate protein 3 *ENSDARG0000009933942
si:ch211-51c14.1ENSDARG0000005464542
zgc:91999ENSDARG0000010500127


Protein motifs (from Interpro)
Interpro ID Name
 IPR001060  FCH domain
 IPR001452  SH3 domain
 IPR027267  AH/BAR domain superfamily
 IPR031160  F-BAR domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030100 regulation of endocytosis IBA
 biological_processGO:0048812 neuron projection morphogenesis IBA
 cellular_componentGO:0005768 endosome IBA


Pathways (from Reactome)
Pathway description
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000032865 pacsin1a / protein kinase C and casein kinase substrate in neurons 1a / Q61644* / Q9BY11* / PACSIN1* / protein kinase C and casein kinase substrate in neurons 1* / Protein kinase C and case...  / complex
 ENSDARG00000042128 Q4V920 / pacsin1b / protein kinase C and casein kinase substrate in neurons 1b / Q61644* / Q9BY11* / PACSIN1* / protein kinase C and casein kinase substrate in neurons 1* / Protein kinase C...  / complex






 

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