ENSDARG00000078014


Danio rerio

Features
Gene ID: ENSDARG00000078014
  
Biological name :pacsin2
  
Synonyms : pacsin2 / protein kinase C and casein kinase substrate in neurons 2
  
Possible biological names infered from orthology : Q9UNF0 / Q9WVE8
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 77933084
Gene end: 77955302
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000123946
Ensembl peptide - ENSDARP00000124620
Ensembl peptide - ENSDARP00000133109
Ensembl peptide - ENSDARP00000124182
NCBI entrez gene - 404601     See in Manteia.
RefSeq - NM_207069
RefSeq - XM_005168591
RefSeq Peptide - NP_996952
swissprot - F1QC13
swissprot - A0A0R4IQU3
swissprot - F8W2S9
swissprot - F8W497
ZFIN ID - ZDB-GENE-040426-2596
Ensembl - ENSDARG00000078014
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PACSIN2ENSGALG00000014159Gallus gallus
 Q9UNF0ENSG00000100266Homo sapiens
 Q9WVE8ENSMUSG00000016664Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q4V920 / pacsin1b / protein kinase C and casein kinase substrate in neurons 1b / Q61644* / Q9BY11* / PACSIN1* / protein kinase C and casein kinase substrate in neurons 1* / Protein kinase C...ENSDARG0000004212855
pacsin1a / protein kinase C and casein kinase substrate in neurons 1a / Q61644* / Q9BY11* / PACSIN1* / protein kinase C and casein kinase substrate in neurons 1* / Protein kinase C and case...ENSDARG0000003286552
pacsin3 / protein kinase C and casein kinase substrate in neurons 3 / Q99JB8* / Q9UKS6* / Protein kinase C and casein kinase II substrate protein 3 *ENSDARG0000009933940
si:ch211-51c14.1ENSDARG0000005464532
zgc:91999ENSDARG0000010500124


Protein motifs (from Interpro)
Interpro ID Name
 IPR001060  FCH domain
 IPR001452  SH3 domain
 IPR024601  Peptidase M1, alanyl aminopeptidase, C-terminal
 IPR027267  AH/BAR domain superfamily
 IPR028521  Protein kinase C and casein kinase substrate in neurons protein 2
 IPR031160  F-BAR domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030036 actin cytoskeleton organization IEA
 biological_processGO:0030100 regulation of endocytosis IBA
 biological_processGO:0070836 caveola assembly IEA
 biological_processGO:0097320 plasma membrane tubulation IEA
 cellular_componentGO:0005768 endosome IBA


Pathways (from Reactome)
Pathway description
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000078014 pacsin2 / protein kinase C and casein kinase substrate in neurons 2 / Q9UNF0* / Q9WVE8*  / complex






 

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