ENSDARG00000035009


Danio rerio

Features
Gene ID: ENSDARG00000035009
  
Biological name :trim35-27
  
Synonyms : trim35-27 / tripartite motif containing 35-27
  
Possible biological names infered from orthology : Q9UPQ4 / TRIM35 / tripartite motif containing 35
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 757435
Gene end: 763744
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000139665
swissprot - A0A0H2UKU5
ZFIN ID - ZDB-GENE-030131-6185
Ensembl - ENSDARG00000035009
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM35ENSGALG00000016595Gallus gallus
 Q9UPQ4ENSG00000104228Homo sapiens
 Trim35ENSMUSG00000022043Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trim35-39 / tripartite motif containing 35-39 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000007124130
trim35-19 / tripartite motif containing 35-19 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009963930
trim35-25 / tripartite motif containing 35-25 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010105530
si:ch211-12p12.2 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010221930
trim35-24 / tripartite motif containing 35-24 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009968430
trim35-23 / tripartite motif containing 35-23 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010236830
si:dkey-37m8.11 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000004023029
trim35-7 / tripartite motif containing 35-7 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000005895829
trim35-21 / tripartite motif containing 35-21 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010230329
trim35-33 / tripartite motif containing 35-33 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000006083829
trim35-20 / tripartite motif containing 35-20 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000007084729
CU571315.1 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000003153429
trim35-22 / tripartite motif containing 35-22 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010226429
si:ch211-175l6.2 / TRIM35 (1 of many) / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010072129
trim35-10 / tripartite motif containing 35-10 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000003307128
CR394535.1 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010319328
si:ch1073-324l1.1 / TRIM35 (1 of many) / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009591328
zmp:0000001316 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009240728
trim35-3 / tripartite motif containing 35-3 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000005225528
trim35-30 / tripartite motif containing 35-30 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000011409928


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr