ENSDARG00000036868


Danio rerio

Features
Gene ID: ENSDARG00000036868
  
Biological name :tbpl1
  
Synonyms : Q5U385 / tbpl1 / TBP-like 1
  
Possible biological names infered from orthology : P62340 / P62380 / TATA-box binding protein like 1 / TATA box-binding protein-like protein 1
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 31596194
Gene end: 31605592
  
Corresponding Affymetrix probe sets: Dr.15927.1.A1_at (Zebrafish Array)   Dr.15927.2.S1_at (Zebrafish Array)   NM_205722_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000053533
Ensembl peptide - ENSDARP00000134538
NCBI entrez gene - 403035     See in Manteia.
RefSeq - NM_205722
RefSeq Peptide - NP_991285
swissprot - Q5U385
ZFIN ID - ZDB-GENE-040520-2
Ensembl - ENSDARG00000036868
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBPL1ENSGALG00000013981Gallus gallus
 TBPL1ENSG00000028839Homo sapiens
 Tbpl1ENSMUSG00000071359Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbp / Q7SXL3 / TATA box binding protein / P20226* / P29037*ENSDARG0000001499439
tbpl2 / Q1JPY4 / TATA box binding protein like 2 / Q6SJ96* / Q6SJ95* / TATA box-binding protein-like protein 2 *ENSDARG0000009730238


Protein motifs (from Interpro)
Interpro ID Name
 IPR000814  TATA-box binding protein
 IPR015445  TATA-Box binding protein-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IMP
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0009792 embryo development ending in birth or egg hatching IMP
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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