ENSGALG00000013981


Gallus gallus

Features
Gene ID: ENSGALG00000013981
  
Biological name :TBPL1
  
Synonyms : Q9YGV8 / TATA box-binding protein-like protein 1 / TBPL1
  
Possible biological names infered from orthology : P62340 / P62380 / TATA-box binding protein like 1
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 56429534
Gene end: 56436829
  
Corresponding Affymetrix probe sets: Gga.4434.1.S1_at (Chicken Array)   Gga.4434.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055961
Ensembl peptide - ENSGALP00000022616
NCBI entrez gene - 395517     See in Manteia.
RefSeq - XM_015284012
RefSeq - NM_204755
RefSeq - XM_015284010
RefSeq - XM_015284011
RefSeq Peptide - NP_990086
swissprot - A0A1I7Q418
swissprot - Q9YGV8
Ensembl - ENSGALG00000013981
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbpl1ENSDARG00000036868Danio rerio
 TBPL1ENSG00000028839Homo sapiens
 Tbpl1ENSMUSG00000071359Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBP / TATA-box-binding protein / P20226* / P29037*ENSGALG0000001117140
TBPL2 / TATA-box binding protein like 2 / Q6SJ95* / Q6SJ96* / TATA box-binding protein-like protein 2 *ENSGALG0000001214539


Protein motifs (from Interpro)
Interpro ID Name
 IPR000814  TATA-box binding protein
 IPR012295  TBP domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001675 acrosome assembly IEA
 biological_processGO:0006235 dTTP biosynthetic process IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007289 spermatid nucleus differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005672 transcription factor TFIIA complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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