ENSG00000028839


Homo sapiens

Features
Gene ID: ENSG00000028839
  
Biological name :TBPL1
  
Synonyms : P62380 / TATA-box binding protein like 1 / TBPL1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q23.2
Gene start: 133952170
Gene end: 133990432
  
Corresponding Affymetrix probe sets: 208398_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000478795
Ensembl peptide - ENSP00000237264
Ensembl peptide - ENSP00000398186
Ensembl peptide - ENSP00000402864
Ensembl peptide - ENSP00000356843
Ensembl peptide - ENSP00000356845
NCBI entrez gene - 9519     See in Manteia.
OMIM - 605521
RefSeq - XM_017011513
RefSeq - NM_001253676
RefSeq - NM_004865
RefSeq Peptide - NP_004856
RefSeq Peptide - NP_001240605
swissprot - Q7Z6T9
swissprot - Q7Z6U1
swissprot - Q7Z6U2
swissprot - Q7Z6U0
swissprot - P62380
Ensembl - ENSG00000028839
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbpl1ENSDARG00000036868Danio rerio
 TBPL1ENSGALG00000013981Gallus gallus
 Tbpl1ENSMUSG00000071359Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBP / P20226 / TATA-box binding proteinENSG0000011259239
TBPL2 / Q6SJ96 / TATA-box binding protein like 2ENSG0000018252138


Protein motifs (from Interpro)
Interpro ID Name
 IPR000814  TATA-box binding protein
 IPR015445  TATA-Box binding protein-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001675 acrosome assembly IEA
 biological_processGO:0006235 dTTP biosynthetic process IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007289 spermatid nucleus differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005672 transcription factor TFIIA complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003713 transcription coactivator activity TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr