Manteia

ENSDARG00000036940

Danio rerio

Features

Gene ID:	ENSDARG00000036940

Biological name :	ctss1

Synonyms :	cathepsin S, ortholog 1 / ctss1

Possible biological names infered from orthology :

Species:	Danio rerio

Chr. number:	19
Strand:	1
Band:
Gene start:	310494
Gene end:	317532

Corresponding Affymetrix probe sets:	Dr.9559.1.A1_at (Zebrafish Array) NM_200426_at (Zebrafish Genome Array with custom cdf files)

Cross references:	Ensembl peptide - ENSDARP00000053637 NCBI entrez gene - 393398 See in Manteia. RefSeq - XM_017352203 RefSeq - NM_200426 RefSeq Peptide - NP_956720 swissprot - Q1L8W8 ZFIN ID - ZDB-GENE-040426-1583 Ensembl - ENSDARG00000036940

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name

Species

No match

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
ctss2.1 / cathepsin S, ortholog2, tandem duplicate 1 / CTSS* / O70370* / P25774* / cathepsin S*	ENSDARG00000074656	47
ctss2.2 / cathepsin S, ortholog 2, tandem duplicate 2 / CTSS* / O70370* / P25774* / cathepsin S*	ENSDARG00000013771	46
ctsl.1 / cathepsin L.1	ENSDARG00000003902	43
ctsk / cathepsin K / P43235* / P55097*	ENSDARG00000040251	43
zgc:174154 / Cts8* / Cts3* / Cts6* / Cts7* / Ctsj* / CTSL* / Ctsm* / Ctsq* / Ctsr* / CTSV* / Q9JIA9* / O60911* / Ctsll3* / Q9R014* / P06797* / P07711* / Q80UB0* / Q91ZF2* / Q9JI81* / BC0516...	ENSDARG00000075527	42
zgc:174153 / Cts8* / Cts3* / Cts6* / Cts7* / Ctsj* / CTSL* / Ctsm* / Ctsq* / Ctsr* / CTSV* / Q9JIA9* / O60911* / Ctsll3* / Q9R014* / P06797* / P07711* / Q80UB0* / Q91ZF2* / Q9JI81* / BC0516...	ENSDARG00000079376	42
MGC174155 / Cathepsin L1-like / Ctsr* / Ctsq* / Ctsm* / CTSL* / Ctsj* / Cts8* / Cts6* / Cts7* / Cts3* / CTSV* / Q91ZF2* / Q9R014* / Q9JIA9* / Ctsll3* / O60911* / P06797* / P07711* / Q80UB0*...	ENSDARG00000095072	42
si:dkey-239j18.2 / Ctsr* / Ctsq* / Ctsm* / CTSL* / Ctsj* / Cts8* / Cts7* / Cts3* / Cts6* / CTSV* / Q9JI81* / Q9R014* / Ctsll3* / O60911* / P06797* / P07711* / Q80UB0* / Q91ZF2* / Q9JIA9* / ...	ENSDARG00000095254	42
si:dkey-26g8.5 / Ctsr* / Ctsq* / Ctsm* / CTSL* / Ctsj* / Cts8* / Cts7* / Cts3* / Cts6* / CTSV* / Q9JI81* / Q9R014* / Ctsll3* / O60911* / P06797* / P07711* / Q80UB0* / Q91ZF2* / Q9JIA9* / BC...	ENSDARG00000089750	42
si:dkey-239j18.3 / Ctsr* / Ctsq* / Ctsm* / CTSL* / Ctsj* / Cts8* / Cts7* / Cts3* / Cts6* / CTSV* / Q9JI81* / Q9R014* / Ctsll3* / O60911* / P06797* / P07711* / Q80UB0* / Q91ZF2* / Q9JIA9* / ...	ENSDARG00000089806	42
si:dkey-269i1.4 / CTSL* / CTSV* / O60911* / P07711* / cathepsin V* / cathepsin L*	ENSDARG00000100833	42
ctsll / cathepsin L, like / Ctsr* / Ctsq* / Ctsm* / CTSL* / Ctsj* / Cts8* / Cts6* / Cts7* / CTSV* / Cts3* / Q91ZF2* / Q9R014* / Q9JIA9* / Ctsll3* / O60911* / P06797* / P07711* / Q80UB0* / Q...	ENSDARG00000011701	42
zgc:174855 / Cts8* / Cts3* / Cts6* / Cts7* / Ctsj* / CTSL* / Ctsm* / Ctsq* / Ctsr* / CTSV* / Q9JIA9* / O60911* / Ctsll3* / Q9R014* / P06797* / P07711* / Q80UB0* / Q91ZF2* / Q9JI81* / BC0516...	ENSDARG00000094559	42
si:dkey-269i1.4 / Ctsr* / Ctsq* / Ctsm* / CTSL* / Ctsj* / Cts8* / Cts7* / Cts3* / Cts6* / CTSV* / Q9JI81* / Q9R014* / Ctsll3* / O60911* / P06797* / P07711* / Q80UB0* / Q91ZF2* / Q9JIA9* / B...	ENSDARG00000095744	42
ctslb / cathepsin Lb / Ctsr* / Ctsq* / Ctsm* / CTSL* / Ctsj* / Cts8* / Cts6* / Cts7* / CTSV* / Cts3* / Q91ZF2* / Q9R014* / Q9JIA9* / Ctsll3* / O60911* / P06797* / P07711* / Q80UB0* / Q9JI81...	ENSDARG00000039173	42
si:dkey-26g8.4 / Ctsr* / Ctsq* / Ctsm* / CTSL* / Ctsj* / Cts8* / Cts7* / Cts3* / Cts6* / CTSV* / Q9JI81* / Q9R014* / Ctsll3* / O60911* / P06797* / P07711* / Q80UB0* / Q91ZF2* / Q9JIA9* / BC...	ENSDARG00000087651	42
ctslb / cathepsin Lb / Ctsr* / Ctsq* / Ctsm* / CTSL* / Ctsj* / Cts8* / Cts6* / Cts7* / CTSV* / Cts3* / Q91ZF2* / Q9R014* / Q9JIA9* / Ctsll3* / O60911* / P06797* / P07711* / Q80UB0* / Q9JI81...	ENSDARG00000074306	42
ctsla / cathepsin La	ENSDARG00000007836	41
cts12 / cathepsin 12	ENSDARG00000042753	38
ctsh / cathepsin H / P09668* / P49935*	ENSDARG00000041108	34

Protein motifs (from Interpro)

Interpro ID	Name
IPR000169	Cysteine peptidase, cysteine active site
IPR000668	Peptidase C1A, papain C-terminal
IPR013201	Cathepsin propeptide inhibitor domain (I29)
IPR025660	Cysteine peptidase, histidine active site
IPR025661	Cysteine peptidase, asparagine active site

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006508	proteolysis	IEA
biological_process	GO:0006955	immune response	IBA
biological_process	GO:0019882	antigen processing and presentation	IBA
biological_process	GO:0034769	basement membrane disassembly	IBA
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process	IBA
cellular_component	GO:0005615	extracellular space	IBA
cellular_component	GO:0005764	lysosome	IBA
molecular_function	GO:0004197	cysteine-type endopeptidase activity	IBA
molecular_function	GO:0008233	peptidase activity	IEA
molecular_function	GO:0008234	cysteine-type peptidase activity	IEA
molecular_function	GO:0016787	hydrolase activity	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr