ENSDARG00000037747


Danio rerio

Features
Gene ID: ENSDARG00000037747
  
Biological name :fscn1b
  
Synonyms : fascin actin-bundling protein 1b / fscn1b
  
Possible biological names infered from orthology : Fascin / fascin actin-bundling protein 1 / FSCN1 / Q16658 / Q61553
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 8662530
Gene end: 8670486
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000094422
NCBI entrez gene - 570314     See in Manteia.
swissprot - A0A0A0MPL5
ZFIN ID - ZDB-GENE-120507-1
Ensembl - ENSDARG00000037747
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FSCN1ENSGALG00000021128Gallus gallus
 FSCN1ENSG00000075618Homo sapiens
 Fscn1ENSMUSG00000029581Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fscn1a / fascin actin-bundling protein 1a / FSCN1* / Q16658* / Q61553* / Fascin * / fascin actin-bundling protein 1*ENSDARG0000005968071
fscn2b / fascin actin-bundling protein 2b, retinal / FSCN2* / O14926* / Q32M02* / Fascin-2 * / fascin actin-bundling protein 2, retinal*ENSDARG0000007439654
fscn2a / fascin actin-bundling protein 2a, retinal / FSCN2* / O14926* / fascin actin-bundling protein 2, retinal*ENSDARG0000005957454


Protein motifs (from Interpro)
Interpro ID Name
 IPR008999  Actin-crosslinking
 IPR010431  Fascin
 IPR022768  Fascin domain
 IPR024703  Fascin, metazoans
 IPR030146  Fascin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007015 actin filament organization IEA
 biological_processGO:0007163 establishment or maintenance of cell polarity IBA
 biological_processGO:0009653 anatomical structure morphogenesis IBA
 biological_processGO:0016477 cell migration IBA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 biological_processGO:0051017 actin filament bundle assembly IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0031941 filamentous actin IBA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0030674 protein binding, bridging IEA
 molecular_functionGO:0051015 actin filament binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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