ENSDARG00000038141


Danio rerio

Features
Gene ID: ENSDARG00000038141
  
Biological name :atf4b
  
Synonyms : activating transcription factor 4b / atf4b
  
Possible biological names infered from orthology : activating transcription factor 4 / ATF4 / Cyclic AMP-dependent transcription factor ATF-4 / P18848 / Q06507
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 24197934
Gene end: 24200819
  
Corresponding Affymetrix probe sets: Dr.5706.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000055608
NCBI entrez gene - 556410     See in Manteia.
RefSeq - NM_001103192
RefSeq Peptide - NP_001096662
swissprot - A7MBV8
ZFIN ID - ZDB-GENE-070928-23
Ensembl - ENSDARG00000038141
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATF4ENSGALG00000012135Gallus gallus
 ATF4ENSG00000128272Homo sapiens
 Atf4ENSMUSG00000042406Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atf4a / Q6NW59 / activating transcription factor 4a / ATF4* / Q06507* / P18848* / activating transcription factor 4* / Cyclic AMP-dependent transcription factor ATF-4 *ENSDARG0000011193930
atf5a / activating transcription factor 5a / ATF5* / O70191* / Q9Y2D1* / activating transcription factor 5* / Cyclic AMP-dependent transcription factor ATF-5 *ENSDARG0000006809617
atf5b / activating transcription factor 5b / ATF5* / O70191* / Q9Y2D1* / activating transcription factor 5* / Cyclic AMP-dependent transcription factor ATF-5 *ENSDARG0000007778516


Protein motifs (from Interpro)
Interpro ID Name
 IPR004827  Basic-leucine zipper domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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