ENSDARG00000038608


Danio rerio

Features
Gene ID: ENSDARG00000038608
  
Biological name :sdhc
  
Synonyms : sdhc / succinate dehydrogenase complex, subunit C, integral membrane protein
  
Possible biological names infered from orthology : Q99643 / Q9CZB0 / succinate dehydrogenase complex subunit C
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 44192652
Gene end: 44199840
  
Corresponding Affymetrix probe sets: Dr.1362.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121444
Ensembl peptide - ENSDARP00000122487
NCBI entrez gene - 445129     See in Manteia.
swissprot - B0S5Q2
swissprot - B0S5Q3
ZFIN ID - ZDB-GENE-040801-26
Ensembl - ENSDARG00000038608
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SDHCENSG00000143252Homo sapiens
 SdhcENSMUSG00000058076Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000701  Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit
 IPR014314  Succinate dehydrogenase, cytochrome b556 subunit
 IPR018495  Succinate dehydrogenase, cytochrome b subunit, conserved site
 IPR034804  Fumarate reductase/succinate dehydrogenase, transmembrane subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006099 tricarboxylic acid cycle IEA
 biological_processGO:0006121 mitochondrial electron transport, succinate to ubiquinone IBA
 biological_processGO:0022900 electron transport chain IEA
 cellular_componentGO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045281 succinate dehydrogenase complex IEA
 molecular_functionGO:0000104 succinate dehydrogenase activity IEA
 molecular_functionGO:0009055 electron transfer activity IEA
 molecular_functionGO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Citric acid cycle (TCA cycle)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000016721 sdha / Q7ZVF3 / succinate dehydrogenase complex, subunit A, flavoprotein (Fp) / Q8K2B3* / P31040* / succinate dehydrogenase complex flavoprotein subunit A* / Succinate dehydrogenase [ubiqui...  / complex
 ENSDARG00000030139 sdhdb / Q68FN7 / succinate dehydrogenase complex, subunit D, integral membrane protein b / SDHD* / Q9CXV1* / O14521* / AP002884.3* / succinate dehydrogenase complex subunit D* / succinate d...  / complex
 ENSDARG00000075768 sdhb / A5PL98 / succinate dehydrogenase complex, subunit B, iron sulfur (Ip) / P21912* / succinate dehydrogenase complex iron sulfur subunit B*  / complex
 ENSDARG00000055712 sdhda / Q6DGM2 / succinate dehydrogenase complex, subunit D, integral membrane protein a / SDHD* / Q9CXV1* / O14521* / AP002884.3* / succinate dehydrogenase complex subunit D* / succinate d...  / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr