ENSDARG00000038801


Danio rerio

Features
Gene ID: ENSDARG00000038801
  
Biological name :klhl20
  
Synonyms : kelch-like family member 20 / klhl20
  
Possible biological names infered from orthology : Kelch-like protein 20 / Q8VCK5 / Q9Y2M5
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 34112100
Gene end: 34126879
  
Corresponding Affymetrix probe sets: Dr.1761.1.A1_at (Zebrafish Array)   NM_213001_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000056665
Ensembl peptide - ENSDARP00000122821
NCBI entrez gene - 406274     See in Manteia.
RefSeq - NM_213001
RefSeq Peptide - NP_998166
swissprot - F1Q5N8
swissprot - E9QC58
ZFIN ID - ZDB-GENE-040426-1935
Ensembl - ENSDARG00000038801
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KLHL20ENSGALG00000036931Gallus gallus
 KLHL20ENSG00000076321Homo sapiens
 Klhl20ENSMUSG00000026705Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
klhl17 / kelch-like family member 17 / Q6TDP3* / Q6TDP4* / Plekhn1* / Kelch-like protein 17 *ENSDARG0000003732449
klhl3 / kelch-like family member 3 / E0CZ16* / Q9UH77* / Kelch-like protein 3 *ENSDARG0000005664743
klhl2 / kelch-like family member 2 / O95198* / Q8JZP3* / Kelch-like protein 2 *ENSDARG0000006178642
klhl5 / kelch-like family member 5 / KLHL4* / KLHL1* / Q96PQ7* / Q9C0H6* / Q9NR64* / Q9JI74* / Kelch-like protein 1 * / kelch like family member 1* / kelch like family member 4* / kelch-lik...ENSDARG0000006212241
klhl18 / kelch-like family member 18 / O94889*ENSDARG0000000430640
klhl8 / kelch-like family member 8 / Q9P2G9*ENSDARG0000010127039
keap1a / kelch-like ECH-associated protein 1aENSDARG0000001613236
keap1b / kelch-like ECH-associated protein 1b / KEAP1* / Q9Z2X8* / Q14145* / kelch like ECH associated protein 1*ENSDARG0000007463435
klhl10a / kelch-like family member 10a / Q9D5V2* / KLHL10* / Q6JEL2* / kelch-like 10* / kelch like family member 10*ENSDARG0000000581435
KLHL28 / kelch like family member 28 / Q9NXS3*ENSDARG0000010167634
klhl10b.1 / kelch-like family member 10b, tandem duplicate 1 / Q9D5V2* / KLHL10* / Q6JEL2* / kelch-like 10* / kelch like family member 10*ENSDARG0000011548932
klhl10b.2 / kelch-like family member 10b, tandem duplicate 2 / Q9D5V2* / KLHL10* / Q6JEL2* / kelch-like 10* / kelch like family member 10*ENSDARG0000011217032
klhl12 / kelch-like family member 12 / Q53G59*ENSDARG0000010063125
KLHL12 (1 of many) / kelch like family member 12 / KLHL12* / Q53G59*ENSDARG0000011272817


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR006652  Kelch repeat type 1
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR011705  BTB/Kelch-associated
 IPR015915  Kelch-type beta propeller
 IPR017096  BTB-kelch protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006895 Golgi to endosome transport IBA
 biological_processGO:0035455 response to interferon-alpha IBA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 biological_processGO:1990390 protein K33-linked ubiquitination IBA
 cellular_componentGO:0005802 trans-Golgi network IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016605 PML body IBA
 cellular_componentGO:0031463 Cul3-RING ubiquitin ligase complex IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IBA
 molecular_functionGO:0019964 interferon-gamma binding IBA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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