ENSDARG00000040291


Danio rerio

Features
Gene ID: ENSDARG00000040291
  
Biological name :cadm4
  
Synonyms : cadm4 / cell adhesion molecule 4
  
Possible biological names infered from orthology : Q8NFZ8 / Q8R464
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 24213078
Gene end: 24518040
  
Corresponding Affymetrix probe sets: Dr.14206.1.A1_at (Zebrafish Array)   NM_001007428_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000113242
Ensembl peptide - ENSDARP00000114285
NCBI entrez gene - 492787     See in Manteia.
RefSeq - XM_005158112
RefSeq - NM_001007428
RefSeq Peptide - NP_001007429
swissprot - F1QF23
swissprot - B0CLV3
ZFIN ID - ZDB-GENE-041114-138
Ensembl - ENSDARG00000040291
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CADM4ENSG00000105767Homo sapiens
 Cadm4ENSMUSG00000054793Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cadm1a / cell adhesion molecule 1a / CADM1* / Q8R5M8* / Q9BY67* / cell adhesion molecule 1*ENSDARG0000003107537
cadm1b / cell adhesion molecule 1b / CADM1* / Q8R5M8* / Q9BY67* / cell adhesion molecule 1*ENSDARG0000004267735
cadm3 / cell adhesion molecule 3 / Q8N126* / Q99N28*ENSDARG0000005701334
cadm2a / cell adhesion molecule 2a / CADM2* / Q8BLQ9* / Q8N3J6* / cell adhesion molecule 2*ENSDARG0000000993031
cadm2b / cell adhesion molecule 2b / CADM2* / Q8BLQ9* / Q8N3J6* / cell adhesion molecule 2*ENSDARG0000006263331
Q58EG3 / nectin3b / nectin cell adhesion molecule 3b / Q9JLB9* / Q9NQS3* / NECTIN3* / nectin cell adhesion molecule 3*ENSDARG0000000660419
nectin1b / nectin cell adhesion molecule 1b / Q9JKF6* / Q15223* / NECTIN1* / nectin cell adhesion molecule 1*ENSDARG0000008603418
nectin4 / nectin cell adhesion molecule 4 / Q96NY8*ENSDARG0000010314818
si:ch211-119e14.9 / Q8R007* / Q96NY8* / NECTIN4* / nectin cell adhesion molecule 4*ENSDARG0000007741918
si:ch73-22o12.1 / PVR* / Q92692* / P15151* / P32507* / NECTIN2* / poliovirus receptor* / nectin cell adhesion molecule 2*ENSDARG0000006283117
CR936977.2 / Q9NQS3* / NECTIN3* / nectin cell adhesion molecule 3*ENSDARG0000010363817
si:ch211-222f23.6ENSDARG0000004288017
nectin1a / nectin cell adhesion molecule 1a / Q9JKF6* / Q15223* / NECTIN1* / nectin cell adhesion molecule 1*ENSDARG0000006976717
si:ch211-141e20.2ENSDARG0000009334916
pvrl2l / poliovirus receptor-related 2 like / PVR* / Q92692* / P15151* / P32507* / NECTIN2* / poliovirus receptor* / nectin cell adhesion molecule 2*ENSDARG0000006339015
BX120005.1 / CRTAM* / O95727* / cytotoxic and regulatory T cell molecule*ENSDARG0000008932713
si:ch211-214p13.3ENSDARG0000008740312


Protein motifs (from Interpro)
Interpro ID Name
 IPR003585  Neurexin/syndecan/glycophorin C
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013162  CD80-like, immunoglobulin C2-set
 IPR013783  Immunoglobulin-like fold
 IPR028807  Cell adhesion molecule 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003234 bulbus arteriosus formation IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000173 bulbus arteriosus bulbus arteriosus elongated , abnormal
bulbus arteriosus has extra parts of type cardiac muscle cell , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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