ENSDARG00000044098


Danio rerio

Features
Gene ID: ENSDARG00000044098
  
Biological name :egr2a
  
Synonyms : early growth response 2a / egr2a
  
Possible biological names infered from orthology : E3 SUMO-protein ligase EGR2 / early growth response 2 / EGR2 / P08152 / P11161
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 43663504
Gene end: 43677471
  
Corresponding Affymetrix probe sets: Dr.17549.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111130
Ensembl peptide - ENSDARP00000115255
Ensembl peptide - ENSDARP00000072456
NCBI entrez gene - 368241     See in Manteia.
RefSeq - NM_183341
RefSeq Peptide - NP_899184
swissprot - E7F266
swissprot - Q8QFX2
ZFIN ID - ZDB-GENE-030723-6
Ensembl - ENSDARG00000044098
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EGR2ENSGALG00000040971Gallus gallus
 EGR2ENSG00000122877Homo sapiens
 Egr2ENSMUSG00000037868Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
egr2b / early growth response 2b / EGR2* / P11161* / P08152* / early growth response 2* / E3 SUMO-protein ligase EGR2 *ENSDARG0000004282658
egr3 / early growth response 3 / P43300* / Q06889* / Mus musculus early growth response 3 (Egr3), transcript variant 3, mRNA.*ENSDARG0000008915641
egr1 / P26632 / early growth response 1 / P08046* / P18146* / Early growth response protein 1 *ENSDARG0000003742137
wt1a / wilms tumor 1a / WT1* / P19544* / Wilms tumor 1* / Wilms tumor 1 homolog*ENSDARG0000003142025
egr4 / early growth response 4 / Q05215* / Q9WUF2* / Early growth response protein 4 *ENSDARG0000007779925
wt1b / wilms tumor 1b / WT1* / P19544* / Wilms tumor 1* / Wilms tumor 1 homolog*ENSDARG0000000799025


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR021849  Early growth response protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr