ENSG00000122877


Homo sapiens

Features
Gene ID: ENSG00000122877
  
Biological name :EGR2
  
Synonyms : early growth response 2 / EGR2 / P11161
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: q21.3
Gene start: 62811996
Gene end: 62919900
  
Corresponding Affymetrix probe sets: 205249_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000490154
Ensembl peptide - ENSP00000242480
Ensembl peptide - ENSP00000387634
Ensembl peptide - ENSP00000402040
NCBI entrez gene - 1959     See in Manteia.
OMIM - 129010
RefSeq - XM_011539427
RefSeq - NM_000399
RefSeq - NM_001136177
RefSeq - NM_001136178
RefSeq - NM_001136179
RefSeq - NM_001321037
RefSeq Peptide - NP_000390
RefSeq Peptide - NP_001129649
RefSeq Peptide - NP_001129650
RefSeq Peptide - NP_001129651
RefSeq Peptide - NP_001307966
swissprot - P11161
swissprot - A0A1B0GUL0
Ensembl - ENSG00000122877
  
Related genetic diseases (OMIM): 145900 - Dejerine-Sottas disease, 145900
  605253 - Neuropathy, congenital hypomyelinating, 1, 605253
  607678 - Charcot-Marie-Tooth disease, type 1D, 607678

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 egr2aENSDARG00000044098Danio rerio
 egr2bENSDARG00000042826Danio rerio
 EGR2ENSGALG00000040971Gallus gallus
 Egr2ENSMUSG00000037868Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
EGR3 / Q06889 / early growth response 3ENSG0000017938841
EGR1 / P18146 / early growth response 1ENSG0000012073838
EGR4 / Q05215 / early growth response 4ENSG0000013562531
WT1 / P19544 / Wilms tumor 1ENSG0000018493725


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR021849  Early growth response protein
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II ISS
 biological_processGO:0006611 protein export from nucleus ISS
 biological_processGO:0007420 brain development TAS
 biological_processGO:0007422 peripheral nervous system development TAS
 biological_processGO:0007611 learning or memory IEA
 biological_processGO:0007622 rhythmic behavior IEA
 biological_processGO:0008045 motor neuron axon guidance IEA
 biological_processGO:0014037 Schwann cell differentiation IEA
 biological_processGO:0016925 protein sumoylation IEA
 biological_processGO:0021569 rhombomere 3 development IEA
 biological_processGO:0021612 facial nerve structural organization IEA
 biological_processGO:0021660 rhombomere 3 formation IEA
 biological_processGO:0021666 rhombomere 5 formation IEA
 biological_processGO:0030278 regulation of ossification IEA
 biological_processGO:0032868 response to insulin IEA
 biological_processGO:0035284 brain segmentation IEA
 biological_processGO:0035914 skeletal muscle cell differentiation IEA
 biological_processGO:0042552 myelination IEA
 biological_processGO:0045444 fat cell differentiation ISS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 biological_processGO:0048168 regulation of neuronal synaptic plasticity IEA
 biological_processGO:0071310 cellular response to organic substance IEA
 cellular_componentGO:0005634 nucleus IC
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001102 RNA polymerase II activating transcription factor binding ISS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding ISS
 molecular_functionGO:0003700 DNA-binding transcription factor activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI
 molecular_functionGO:0044212 transcription regulatory region DNA binding ISS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0071837 HMG box domain binding IEA


Pathways (from Reactome)
Pathway description
Transcriptional regulation of white adipocyte differentiation
Activation of anterior HOX genes in hindbrain development during early embryogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0001171 Ectrodactyly (hands) 
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 HP:0001178 Claw hand deformities (in severe cases) 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001270 Motor retardation 
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 HP:0001284 Areflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001291 Abnormality of the cranial nerves "Abnormality affecting one or more of the cranial nerves, which emerge directly from the brain stem." [HPO:curators.]
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001425 Heterogeneous 
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 HP:0001761 Pes cavus 
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 HP:0001765 Hammer toes 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002751 Kyphoscoliosis 
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 HP:0002922 Increased CSF protein 
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 HP:0002936 Distal sensory impairment 
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 HP:0003376 Steppage gait "An abnormal gait pattern that arises from weakness of the pretibial and peroneal muscles due to a lower motor neuron lesion. Affected patients have footdrop and are unable to dorsiflex and evert the foot. The leg is lifted high on walking so that the toes clear the ground, and there may be a slapping noise when the foot strikes the ground again." [HPO:curators]
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 HP:0003380 Decreased number of myelinated fibers "A loss of myelinated nerve fibers (in general, this finding can be observed on nerve biopsy)." [HPO:curators]
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 HP:0003382 Hypertrophic nerve changes 
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 HP:0003383 Onion bulb formations on nerve biopsy 
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 HP:0003431 Decreased motor nerve conduction velocity (NCV) 
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 HP:0003481 Segmental demyelination/remyelination 
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 HP:0003484 Upper limb involvement may occur later 
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 HP:0003577 Onset at birth 
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 HP:0003593 Early onset 
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 HP:0003621 Juvenile onset 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003828 Variable expressivity 
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 HP:0007182 Hypomyelination on nerve biopsy 
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 HP:0009027 Foot dorsiflexor weakness 
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0010871 Sensory ataxia "Incoordination of movement caused by a deficit in the sensory nervous system. Sensory ataxia can be distinguished from cerebellar ataxia by asking the patient to close his or her eyes. Persons with cerebellar ataxia show only a minimal worsening of symptoms, whereas persons with sensory ataxia show a marked worsening of symptoms." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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