ENSDARG00000045156


Danio rerio

Features
Gene ID: ENSDARG00000045156
  
Biological name :rgs9b
  
Synonyms : regulator of G protein signaling 9b / rgs9b
  
Possible biological names infered from orthology : O54828 / O75916 / regulator of G protein signaling 9 / RGS9
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 18681423
Gene end: 18717659
  
Corresponding Affymetrix probe sets: Dr.16778.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000119059
Ensembl peptide - ENSDARP00000105788
NCBI entrez gene - 793087     See in Manteia.
RefSeq - NM_200830
RefSeq - XM_021480167
RefSeq Peptide - NP_957124
swissprot - Q6ZM84
swissprot - A8DZ63
ZFIN ID - ZDB-GENE-040426-1708
Ensembl - ENSDARG00000045156
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RGS9ENSGALG00000029610Gallus gallus
 RGS9ENSG00000108370Homo sapiens
 Rgs9ENSMUSG00000020599Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rgs9a / regulator of G protein signaling 9a / RGS9* / O75916* / regulator of G protein signaling 9*ENSDARG0000003792551
rgs11 / regulator of G protein signaling 11 / O94810*ENSDARG0000003764634
rgs6 / regulator of G protein signaling 6 / P49758*ENSDARG0000001562726
rgs7a / regulator of G protein signaling 7a / RGS7* / O54829* / P49802* / regulator of G protein signaling 7*ENSDARG0000001658425
rgs7b / regulator of G protein signaling 7b / RGS7* / O54829* / P49802* / regulator of G protein signaling 7*ENSDARG0000009668722
rgs12b / regulator of G protein signaling 12b / RGS12* / O14924* / Q8CGE9* / regulator of G protein signaling 12*ENSDARG0000003677418
rgs12a / regulator of G protein signaling 12a / RGS12* / O14924* / Q8CGE9* / regulator of G protein signaling 12*ENSDARG0000000961016
rgs14a / regulator of G protein signaling 14a / RGS14* / O43566* / P97492* / regulator of G protein signaling 14*ENSDARG0000002152110
CU019662.1 / RGS14* / O43566* / regulator of G protein signaling 14*ENSDARG0000006020010
si:ch211-117l17.6ENSDARG000001020598


Protein motifs (from Interpro)
Interpro ID Name
 IPR000591  DEP domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR015898  G-protein gamma-like domain
 IPR016137  RGS domain
 IPR024066  RGS, subdomain 1/3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005834 heterotrimeric G-protein complex IEA
 cellular_componentGO:0005886 plasma membrane IBA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0005096 GTPase activator activity IBA


Pathways (from Reactome)
Pathway description
Inactivation, recovery and regulation of the phototransduction cascade
Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000055377 gnb5b / Q6PBY0 / guanine nucleotide binding protein (G protein), beta 5b / GNB5* / O14775* / P62881* / G protein subunit beta 5* / guanine nucleotide binding protein (G protein), beta 5*  / complex / reaction
 ENSDARG00000086756 RGS9BP / si:ch73-167i17.6 / Q6ZS82* / regulator of G protein signaling 9 binding protein*  / complex
 ENSDARG00000099685 gnb5a / A1L271 / guanine nucleotide binding protein (G protein), beta 5a / GNB5* / P62881* / O14775* / G protein subunit beta 5* / guanine nucleotide binding protein (G protein), beta 5*  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr