ENSDARG00000045628


Danio rerio

Features
Gene ID: ENSDARG00000045628
  
Biological name :rab34a
  
Synonyms : rab34a / RAB34, member RAS oncogene family a
  
Possible biological names infered from orthology : P0DI83 / Q9BZG1 / RAB34 / RAB34, member RAS oncogene family
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 15459974
Gene end: 15469096
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000012152
Ensembl peptide - ENSDARP00000138392
Ensembl peptide - ENSDARP00000120109
NCBI entrez gene - 450074     See in Manteia.
RefSeq - NM_001006094
RefSeq - XM_005157422
RefSeq Peptide - NP_001006094
swissprot - E9QHJ1
swissprot - Q5XJS4
swissprot - A0A0R4IRM7
ZFIN ID - ZDB-GENE-041010-197
Ensembl - ENSDARG00000045628
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAB34ENSGALG00000026315Gallus gallus
 RAB34ENSG00000109113Homo sapiens
 Rab34ENSMUSG00000002059Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab34b / RAB34, member RAS oncogene family b / RAB34* / Q9BZG1* / P0DI83* / RAB34, member RAS oncogene family*ENSDARG0000001097767
rab36 / RAB36, member RAS oncogene family / O95755* / Q8CAM5* / Mus musculus RAB36, member RAS onco family (Rab36), transcript variant 1, mRNA.*ENSDARG0000001405855
rab41 / RAB41, member RAS oncogene familyENSDARG0000002988528
rab6a / RAB6A, member RAS oncogene family / RAB6C* / RAB6D* / P20340* / Q9H0N0* / P35279* / RAB6C, member RAS oncogene family* / RAB6D, member RAS oncogene family*ENSDARG0000010371427
rab6ba / RAB6B, member RAS oncogene family a / RAB6B* / Q9NRW1* / P61294* / RAB6B, member RAS oncogene family*ENSDARG0000003452227
rab6bb / RAB6B, member RAS oncogene family b / RAB6B* / Q9NRW1* / P61294* / RAB6B, member RAS oncogene family*ENSDARG0000003134326


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr