ENSDARG00000052522


Danio rerio

Features
Gene ID: ENSDARG00000052522
  
Biological name :snx11
  
Synonyms : snx11 / sorting nexin 11
  
Possible biological names infered from orthology : Q91WL6 / Q9Y5W9
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 20605191
Gene end: 20616160
  
Corresponding Affymetrix probe sets: Dr.16273.1.S1_at (Zebrafish Array)   NM_001044316_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000096134
NCBI entrez gene - 492678     See in Manteia.
RefSeq - NM_001044316
RefSeq - XM_021480062
RefSeq Peptide - NP_001037781
swissprot - F1R6M7
ZFIN ID - ZDB-GENE-041111-253
Ensembl - ENSDARG00000052522
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNX11ENSGALG00000017553Gallus gallus
 SNX11ENSG00000002919Homo sapiens
 Snx11ENSMUSG00000020876Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
snx10a / F1Q506 / sorting nexin 10a / SNX10* / Q9Y5X0* / sorting nexin 10*ENSDARG0000000440517
snx10b / A8WG21 / sorting nexin 10b / SNX10* / Q9Y5X0* / Q9CWT3* / sorting nexin 10*ENSDARG0000004047416
snx3 / sorting nexin 3 / O60493*ENSDARG000000086789
snx12 / sorting nexin 12 / Q9UMY4*ENSDARG000000190608
BX571678.1ENSDARG000001166136


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR028655  Sorting nexin-11


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0016050 vesicle organization IBA
 cellular_componentGO:0005768 endosome IBA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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