ENSDARG00000040474


Danio rerio

Features
Gene ID: ENSDARG00000040474
  
Biological name :snx10b
  
Synonyms : A8WG21 / snx10b / sorting nexin 10b
  
Possible biological names infered from orthology : Q9CWT3 / Q9Y5X0 / SNX10 / sorting nexin 10
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 21033633
Gene end: 21038015
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000059238
NCBI entrez gene - 569469     See in Manteia.
RefSeq - NM_001110396
RefSeq Peptide - NP_001103866
swissprot - A8WG21
ZFIN ID - ZDB-GENE-070628-1
Ensembl - ENSDARG00000040474
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNX10ENSGALG00000011046Gallus gallus
 SNX10ENSG00000086300Homo sapiens
 Snx10ENSMUSG00000038301Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
snx10a / F1Q506 / sorting nexin 10a / SNX10* / Q9Y5X0* / sorting nexin 10*ENSDARG0000000440558
snx11 / sorting nexin 11 / Q91WL6* / Q9Y5W9*ENSDARG0000005252247
BX571678.1ENSDARG0000011661332
snx3 / sorting nexin 3 / O60493*ENSDARG0000000867825
snx12 / sorting nexin 12 / Q9UMY4*ENSDARG0000001906024


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016050 vesicle organization IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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