ENSGALG00000011046


Gallus gallus

Features
Gene ID: ENSGALG00000011046
  
Biological name :SNX10
  
Synonyms : SNX10 / sorting nexin-10
  
Possible biological names infered from orthology : Q9CWT3 / Q9Y5X0
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 32275230
Gene end: 32308776
  
Corresponding Affymetrix probe sets: Gga.8752.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053914
Ensembl peptide - ENSGALP00000062767
Ensembl peptide - ENSGALP00000017972
Ensembl peptide - ENSGALP00000046694
NCBI entrez gene - 420628     See in Manteia.
RefSeq - XM_015281471
RefSeq - XM_015281467
RefSeq - XM_015281468
RefSeq - XM_015281469
RefSeq - XM_015281470
RefSeq - NM_001030986
RefSeq Peptide - NP_001026157
swissprot - A0A1L1RVB0
swissprot - F1NMH3
swissprot - A0A1D5PM41
Ensembl - ENSGALG00000011046
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A8WG21ENSDARG00000040474Danio rerio
 F1Q506ENSDARG00000004405Danio rerio
 SNX10ENSG00000086300Homo sapiens
 Snx10ENSMUSG00000038301Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX11 / sorting nexin 11 / Q91WL6* / Q9Y5W9*ENSGALG0000001755348
SNX12 / sorting nexin-12 / Q9UMY4*ENSGALG0000000565921
SNX3 / sorting nexin 3 / O60493*ENSGALG0000001530419


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0007032 endosome organization IEA
 biological_processGO:0016050 vesicle organization IBA
 biological_processGO:0030316 osteoclast differentiation IEA
 biological_processGO:0060271 cilium assembly IEA
 biological_processGO:0061512 protein localization to cilium IEA
 biological_processGO:0071539 protein localization to centrosome IEA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005768 endosome IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 cellular_componentGO:0031313 extrinsic component of endosome membrane IEA
 molecular_functionGO:0005545 1-phosphatidylinositol binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0051117 ATPase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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