ENSGALG00000005659


Gallus gallus

Features
Gene ID: ENSGALG00000005659
  
Biological name :SNX12
  
Synonyms : SNX12 / sorting nexin-12
  
Possible biological names infered from orthology : Q9UMY4
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 2433716
Gene end: 2437788
  
Corresponding Affymetrix probe sets: GgaAffx.13157.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009066
Ensembl peptide - ENSGALP00000053217
NCBI entrez gene - 428704     See in Manteia.
RefSeq - NM_001031533
RefSeq Peptide - NP_001026704
swissprot - F1NGG2
Ensembl - ENSGALG00000005659
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx12ENSDARG00000019060Danio rerio
 SNX12ENSG00000147164Homo sapiens
 Snx12ENSMUSG00000046032Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX3 / sorting nexin 3 / O60493*ENSGALG0000001530481
SNX11 / sorting nexin 11 / Q91WL6* / Q9Y5W9*ENSGALG0000001755329
SNX10 / sorting nexin-10 / Q9CWT3* / Q9Y5X0*ENSGALG0000001104627


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0010955 negative regulation of protein processing IEA
 biological_processGO:0016050 vesicle organization IBA
 biological_processGO:0030100 regulation of endocytosis IEA
 biological_processGO:0042177 negative regulation of protein catabolic process IEA
 biological_processGO:0051224 negative regulation of protein transport IEA
 biological_processGO:2000642 negative regulation of early endosome to late endosome transport IEA
 cellular_componentGO:0005768 endosome IBA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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