ENSG00000147164


Homo sapiens

Features
Gene ID: ENSG00000147164
  
Biological name :SNX12
  
Synonyms : Q9UMY4 / SNX12 / sorting nexin 12
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q13.1
Gene start: 71056332
Gene end: 71073426
  
Corresponding Affymetrix probe sets: 224684_at (Human Genome U133 Plus 2.0 Array)   231723_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000483613
Ensembl peptide - ENSP00000276105
Ensembl peptide - ENSP00000363392
Ensembl peptide - ENSP00000481314
NCBI entrez gene - 29934     See in Manteia.
OMIM - 300883
RefSeq - NM_001256187
RefSeq - NM_001256185
RefSeq - NM_001256186
RefSeq - NM_001256188
RefSeq - NM_013346
RefSeq Peptide - NP_037478
RefSeq Peptide - NP_001243114
RefSeq Peptide - NP_001243115
RefSeq Peptide - NP_001243116
RefSeq Peptide - NP_001243117
swissprot - Q3SYF1
swissprot - A0A087X0R6
swissprot - Q9UMY4
Ensembl - ENSG00000147164
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx12ENSDARG00000019060Danio rerio
 SNX12ENSGALG00000005659Gallus gallus
 Snx12ENSMUSG00000046032Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX3 / O60493 / sorting nexin 3ENSG0000011233578
SNX11 / Q9Y5W9 / sorting nexin 11ENSG0000000291927
SNX10 / Q9Y5X0 / sorting nexin 10ENSG0000008630025


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR036871  PX domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010629 negative regulation of gene expression IMP
 biological_processGO:0010955 negative regulation of protein processing IDA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016050 vesicle organization IBA
 biological_processGO:0030100 regulation of endocytosis IMP
 biological_processGO:0042177 negative regulation of protein catabolic process IDA
 biological_processGO:0051224 negative regulation of protein transport IDA
 biological_processGO:2000642 negative regulation of early endosome to late endosome transport IDA
 cellular_componentGO:0005769 early endosome IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr