ENSMUSG00000046032


Mus musculus

Features
Gene ID: ENSMUSG00000046032
  
Biological name :Snx12
  
Synonyms : Snx12 / sorting nexin 12
  
Possible biological names infered from orthology : Q9UMY4
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: D
Gene start: 101097786
Gene end: 101222563
  
Corresponding Affymetrix probe sets: 10606001 (MoGene1.0st)   1421797_a_at (Mouse Genome 430 2.0 Array)   1454807_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000077038
Ensembl peptide - ENSMUSP00000113117
Ensembl peptide - ENSMUSP00000119102
NCBI entrez gene - 55988     See in Manteia.
MGI - MGI:1919331
RefSeq - XM_011247646
RefSeq - NM_001110310
RefSeq - NM_001110311
RefSeq - NM_018875
RefSeq - XM_011247645
RefSeq Peptide - NP_061363
RefSeq Peptide - NP_001103780
RefSeq Peptide - NP_001103781
swissprot - Q3TGS7
swissprot - Q3V2H3
swissprot - Q6ZWQ5
Ensembl - ENSMUSG00000046032
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx12ENSDARG00000019060Danio rerio
 SNX12ENSGALG00000005659Gallus gallus
 SNX12ENSG00000147164Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Snx3 / sorting nexin 3 / O60493*ENSMUSG0000001980474
Snx11 / Q91WL6 / Sorting nexin-11 / Q9Y5W9*ENSMUSG0000002087628
Snx10 / Q9CWT3 / sorting nexin 10 / Q9Y5X0*ENSMUSG0000003830124


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR036871  PX domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0010955 negative regulation of protein processing IEA
 biological_processGO:0030100 regulation of endocytosis IEA
 biological_processGO:0042177 negative regulation of protein catabolic process IEA
 biological_processGO:0051224 negative regulation of protein transport IEA
 biological_processGO:2000642 negative regulation of early endosome to late endosome transport IEA
 cellular_componentGO:0005769 early endosome IEA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gimap5m1Btlr/Gimap5m1Btlr,Tg(TcraH-Y,TcrbH-Y)71Vbo/0
Genetic Background: involves: C57BL/6J * DBA/2J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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