ENSDARG00000053200


Danio rerio

Features
Gene ID: ENSDARG00000053200
  
Biological name :dis3l
  
Synonyms : dis3l / DIS3 like exosome 3-5 exoribonuclease
  
Possible biological names infered from orthology : DIS3-like exonuclease 1 / Q8C0S1 / Q8TF46
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 34241319
Gene end: 34256374
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000069661
NCBI entrez gene - 560362     See in Manteia.
RefSeq - NM_001110458
RefSeq Peptide - NP_001103928
swissprot - F1Q9I9
ZFIN ID - ZDB-GENE-070209-95
Ensembl - ENSDARG00000053200
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DIS3LENSGALG00000007643Gallus gallus
 DIS3LENSG00000166938Homo sapiens
 Dis3lENSMUSG00000032396Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dis3 / DIS3 exosome endoribonuclease and 3-5 exoribonuclease / Q9CSH3* / Q9Y2L1* / Exosome complex exonuclease RRP44 * / DIS3 homolog, exosome endoribonuclease and 3-5 exoribonuclease*ENSDARG0000006055930
dis3l2 / DIS3 like 3-5 exoribonuclease 2 / Q8CI75* / Q8IYB7* / DIS3-like exonuclease 2 *ENSDARG0000003325923


Protein motifs (from Interpro)
Interpro ID Name
 IPR012340  Nucleic acid-binding, OB-fold
 IPR022966  Ribonuclease II/R, conserved site
 IPR031192  DIS3-like exonuclease 1
 IPR033770  Exosome complex exonuclease RRP44, S1 domain
 IPR033771  Rrp44-like cold shock domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016075 rRNA catabolic process IEA
 biological_processGO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEA
 molecular_functionGO:0000175 3"-5"-exoribonuclease activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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