ENSDARG00000053232


Danio rerio

Features
Gene ID: ENSDARG00000053232
  
Biological name :itgb1b.1
  
Synonyms : integrin, beta 1b.1 / itgb1b.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 43619555
Gene end: 43635777
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124046
NCBI entrez gene - 566771     See in Manteia.
RefSeq - NM_001034979
RefSeq Peptide - NP_001030151
swissprot - F8W3S8
ZFIN ID - ZDB-GENE-060803-3
Ensembl - ENSDARG00000053232
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
itgb1a / integrin, beta 1a / ITGB1* / P05556* / P09055* / Integrin beta-1 * / integrin subunit beta 1*ENSDARG0000007186369
itgb1b.1 / itgb1b.2 / integrin, beta 1b.2ENSDARG0000002268964
itgb1b / integrin, beta 1b / ITGB1* / P05556* / integrin subunit beta 1*ENSDARG0000010448452
itgb2 / integrin, beta 2 / Itgb2l* / P05107* / Q3UV74* / integrin subunit beta 2* / Integrin beta-2-like protein *ENSDARG0000001693942
itgb3b / integrin beta 3b / ITGB3* / P05106* / O54890* / AC068234.1* / Integrin beta-3 * / integrin subunit beta 3*ENSDARG0000004507042
itgb3a / integrin beta 3a / ITGB3* / P05106* / AC068234.1* / integrin subunit beta 3*ENSDARG0000005676741
itgb5 / integrin, beta 5 / P18084* / integrin subunit beta 5*ENSDARG0000001294240
itgb6 / integrin, beta 6 / P18564* / Q9Z0T9* / integrin subunit beta 6*ENSDARG0000000249439
itgb7 / integrin, beta 7 / P26010* / P26011* / integrin subunit beta 7*ENSDARG0000004431837
itgb4 / integrin, beta 4 / A2A863* / P16144* / integrin subunit beta 4*ENSDARG0000002850733
itgb8 / integrin, beta 8 / P26012* / integrin subunit beta 8*ENSDARG0000002822226
CABZ01058721.1 / ITGB1* / P05556* / integrin subunit beta 1*ENSDARG0000010992921
itgbl1 / integrin, beta-like 1 / O95965* / Q8VDV0* / integrin subunit beta like 1* / Integrin beta-like protein 1 *ENSDARG0000004098511


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR002369  Integrin beta subunit, VWA domain
 IPR012896  Integrin beta subunit, tail
 IPR013111  EGF-like domain, extracellular
 IPR014836  Integrin beta subunit, cytoplasmic domain
 IPR015812  Integrin beta subunit
 IPR032695  Integrin domain superfamily
 IPR033760  Integrin beta N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007160 cell-matrix adhesion IEA
 biological_processGO:0007229 integrin-mediated signaling pathway IEA
 cellular_componentGO:0008305 integrin complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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