Manteia

ENSDARG00000056767

Danio rerio

Features

Gene ID:	ENSDARG00000056767

Biological name :	itgb3a

Synonyms :	integrin beta 3a / itgb3a

Possible biological names infered from orthology :	AC068234.1 / Integrin beta-3 / integrin subunit beta 3 / ITGB3 / O54890 / P05106

Species:	Danio rerio

Chr. number:	3
Strand:	1
Band:
Gene start:	19621034
Gene end:	19649535

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000014515 NCBI entrez gene - 564266 See in Manteia. RefSeq - NM_001037235 RefSeq Peptide - NP_001032312 swissprot - B3DIV8 ZFIN ID - ZDB-GENE-071207-1 Ensembl - ENSDARG00000056767

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
itgb3b / integrin beta 3b / ITGB3* / P05106* / O54890* / AC068234.1* / Integrin beta-3 * / integrin subunit beta 3*	ENSDARG00000045070	66
itgb5 / integrin, beta 5 / P18084* / integrin subunit beta 5*	ENSDARG00000012942	50
itgb6 / integrin, beta 6 / P18564* / Q9Z0T9* / integrin subunit beta 6*	ENSDARG00000002494	43
itgb1b.1 / integrin, beta 1b.1	ENSDARG00000053232	41
itgb1a / integrin, beta 1a / ITGB1* / P05556* / P09055* / Integrin beta-1 * / integrin subunit beta 1*	ENSDARG00000071863	40
itgb7 / integrin, beta 7 / P26010* / P26011* / integrin subunit beta 7*	ENSDARG00000044318	36
itgb2 / integrin, beta 2 / Itgb2l* / P05107* / Q3UV74* / integrin subunit beta 2* / Integrin beta-2-like protein *	ENSDARG00000016939	35
itgb4 / integrin, beta 4 / A2A863* / P16144* / integrin subunit beta 4*	ENSDARG00000028507	32
itgb1b.1 / itgb1b.2 / integrin, beta 1b.2	ENSDARG00000022689	30
itgb8 / integrin, beta 8 / P26012* / integrin subunit beta 8*	ENSDARG00000028222	29
itgb1b / integrin, beta 1b / ITGB1* / P05556* / integrin subunit beta 1*	ENSDARG00000104484	28
CABZ01058721.1 / ITGB1* / P05556* / integrin subunit beta 1*	ENSDARG00000109929	14
itgbl1 / integrin, beta-like 1 / O95965* / Q8VDV0* / integrin subunit beta like 1* / Integrin beta-like protein 1 *	ENSDARG00000040985	10

Protein motifs (from Interpro)

Interpro ID	Name
IPR002035	von Willebrand factor, type A
IPR002369	Integrin beta subunit, VWA domain
IPR012896	Integrin beta subunit, tail
IPR014836	Integrin beta subunit, cytoplasmic domain
IPR015812	Integrin beta subunit
IPR016201	PSI domain
IPR027068	Integrin beta-3 subunit
IPR032695	Integrin domain superfamily
IPR033760	Integrin beta N-terminal

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007044	cell-substrate junction assembly	IEA
biological_process	GO:0007155	cell adhesion	IEA
biological_process	GO:0007160	cell-matrix adhesion	IEA
biological_process	GO:0007229	integrin-mediated signaling pathway	IEA
biological_process	GO:0030334	regulation of cell migration	IEA
biological_process	GO:0060055	angiogenesis involved in wound healing	IEA
biological_process	GO:0070527	platelet aggregation	IEA
cellular_component	GO:0008305	integrin complex	IEA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA

Pathways (from Reactome)

Pathway description

Platelet degranulation

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr