ENSDARG00000053500


Danio rerio

Features
Gene ID: ENSDARG00000053500
  
Biological name :cbsa
  
Synonyms : cbsa / cystathionine-beta-synthase a
  
Possible biological names infered from orthology : CBS / CBSL / cystathionine-beta-synthase / cystathionine-beta-synthase like / P0DN79 / P35520 / Q91WT9
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 29068649
Gene end: 29093562
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000053931
Ensembl peptide - ENSDARP00000155239
Ensembl peptide - ENSDARP00000110727
NCBI entrez gene - 550524     See in Manteia.
RefSeq - NM_001111232
RefSeq Peptide - NP_001104702
swissprot - E9QG18
swissprot - A9JT04
ZFIN ID - ZDB-GENE-050417-367
Ensembl - ENSDARG00000053500
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000019175Gallus gallus
 ENSGALG00000016196Gallus gallus
 CBSENSG00000160200Homo sapiens
 CBSLENSG00000274276Homo sapiens
 CbsENSMUSG00000024039Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cbsb / cystathionine-beta-synthase b / CBS* / CBSL* / Q91WT9* / P0DN79* / P35520* / cystathionine-beta-synthase* / cystathionine-beta-synthase like*ENSDARG0000001094679


Protein motifs (from Interpro)
Interpro ID Name
 IPR000644  CBS domain
 IPR001216  Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site
 IPR001926  Pyridoxal-phosphate dependent enzyme
 IPR005857  Cystathionine beta-synthase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006535 cysteine biosynthetic process from serine IEA
 biological_processGO:0008652 cellular amino acid biosynthetic process IEA
 biological_processGO:0019343 cysteine biosynthetic process via cystathionine IEA
 biological_processGO:0019344 cysteine biosynthetic process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0004122 cystathionine beta-synthase activity IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0020037 heme binding IBA
 molecular_functionGO:0030170 pyridoxal phosphate binding IBA


Pathways (from Reactome)
Pathway description
Cysteine formation from homocysteine


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000010946 cbsb / cystathionine-beta-synthase b / CBS* / CBSL* / Q91WT9* / P0DN79* / P35520* / cystathionine-beta-synthase* / cystathionine-beta-synthase like*  / complex
 ENSDARG00000053500 cbsa / cystathionine-beta-synthase a / CBS* / CBSL* / Q91WT9* / P0DN79* / P35520* / cystathionine-beta-synthase* / cystathionine-beta-synthase like*  / complex






 

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