Manteia

ENSDARG00000053580

Danio rerio

Features

Gene ID:	ENSDARG00000053580

Biological name :	htr1fb

Synonyms :	5-hydroxytryptamine (serotonin) receptor 1Fb / htr1fb

Possible biological names infered from orthology :	5-hydroxytryptamine receptor 1F / 5-hydroxytryptamine (serotonin) receptor 1F / HTR1F / P30939 / Q02284

Species:	Danio rerio

Chr. number:	1
Strand:	1
Band:
Gene start:	33634186
Gene end:	33635304

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000070108 NCBI entrez gene - 100004819 See in Manteia. swissprot - B8JII2 ZFIN ID - ZDB-GENE-090312-140 Ensembl - ENSDARG00000053580

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
HTR1F	ENSGALG00000015494	Gallus gallus
HTR1F	ENSG00000179097	Homo sapiens
Htr1f	ENSMUSG00000050783	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
htr1fa / 5-hydroxytryptamine (serotonin) receptor 1Fa / HTR1F* / Q02284* / P30939* / 5-hydroxytryptamine receptor 1F* / 5-hydroxytryptamine (serotonin) receptor 1F*	ENSDARG00000109862	56
htr1d / 5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled / P28221* / Q61224* / 5-hydroxytryptamine receptor 1D* / 5-hydroxytryptamine (serotonin) receptor 1D*	ENSDARG00000054124	43
htr1b / 5-hydroxytryptamine (serotonin) receptor 1B / P28222* / P28334* / 5-hydroxytryptamine receptor 1B*	ENSDARG00000053987	41
htr1aa / 5-hydroxytryptamine (serotonin) receptor 1A a / HTR1A* / Q64264* / P08908* / 5-hydroxytryptamine receptor 1A* / 5-hydroxytryptamine (serotonin) receptor 1A*	ENSDARG00000093745	39
htr1ab / 5-hydroxytryptamine (serotonin) receptor 1A b	ENSDARG00000057098	38
htr5ab / 5-hydroxytryptamine (serotonin) receptor 5A, genome duplicate b / HTR5A* / P47898* / P30966* / 5-hydroxytryptamine receptor 5A* / 5-hydroxytryptamine (serotonin) receptor 5A*	ENSDARG00000068557	34
htr5aa / 5-hydroxytryptamine (serotonin) receptor 5A, genome duplicate a / HTR5A* / P47898* / P30966* / 5-hydroxytryptamine receptor 5A* / 5-hydroxytryptamine (serotonin) receptor 5A*	ENSDARG00000038869	33
htr7a / 5-hydroxytryptamine (serotonin) receptor 7a / HTR7* / P34969* / P32304* / 5-hydroxytryptamine receptor 7* / 5-hydroxytryptamine (serotonin) receptor 7*	ENSDARG00000056949	32
htr7c / 5-hydroxytryptamine (serotonin) receptor 7c	ENSDARG00000095272	32
FO704724.1 / HTR7* / P34969* / 5-hydroxytryptamine receptor 7*	ENSDARG00000099854	32
htr7b / 5-hydroxytryptamine (serotonin) receptor 7b	ENSDARG00000027587	32
adra2c / Q90WY6 / adrenoceptor alpha 2C / P18825* / Q01337* / Alpha-2C adrenergic receptor *	ENSDARG00000069669	31
adra2db / adrenergic, alpha-2D-, receptor b	ENSDARG00000054667	31
FP236542.1 / ADRA2B* / P18089* / adrenoceptor alpha 2B*	ENSDARG00000116988	31
adra2a / adrenoceptor alpha 2A / P08913*	ENSDARG00000040841	30
adra2b / adrenoceptor alpha 2B / P18089*	ENSDARG00000102096	30
adra2da / adrenergic, alpha-2D-, receptor a	ENSDARG00000091277	30
adra1aa / adrenoceptor alpha 1Aa / ADRA1A* / P35348* / adrenoceptor alpha 1A*	ENSDARG00000028725	30
adra1ab / adrenoceptor alpha 1Ab / ADRA1A* / P35348* / P97718* / adrenoceptor alpha 1A* / Alpha-1A adrenergic receptor *	ENSDARG00000027638	29
adra1ba / adrenoceptor alpha 1Ba / ADRA1B* / P35368* / adrenoceptor alpha 1B*	ENSDARG00000011317	28

Protein motifs (from Interpro)

Interpro ID	Name
IPR000276	G protein-coupled receptor, rhodopsin-like
IPR002231	5-hydroxytryptamine receptor family
IPR017452	GPCR, rhodopsin-like, 7TM

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007165	signal transduction	IEA
biological_process	GO:0007186	G-protein coupled receptor signaling pathway	IEA
biological_process	GO:0098664	G-protein coupled serotonin receptor signaling pathway	IEA
cellular_component	GO:0005886	plasma membrane	IEA
cellular_component	GO:0005887	integral component of plasma membrane	IEA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA
molecular_function	GO:0004871	obsolete signal transducer activity	IEA
molecular_function	GO:0004930	G-protein coupled receptor activity	IEA
molecular_function	GO:0004993	G-protein coupled serotonin receptor activity	IBA
molecular_function	GO:0030594	neurotransmitter receptor activity	IBA

Pathways (from Reactome)

Pathway description

Serotonin receptors

G alpha (i) signalling events

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr