ENSDARG00000054036


Danio rerio

Features
Gene ID: ENSDARG00000054036
  
Biological name :rnf34b
  
Synonyms : ring finger protein 34b / rnf34b
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase RNF34 / Q969K3 / Q99KR6 / ring finger protein 34 / RNF34
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 41765616
Gene end: 41817109
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000138369
Ensembl peptide - ENSDARP00000132154
NCBI entrez gene - 568879     See in Manteia.
RefSeq - NM_001110035
RefSeq Peptide - NP_001103505
swissprot - F1RCH2
swissprot - F1QYQ0
ZFIN ID - ZDB-GENE-071004-31
Ensembl - ENSDARG00000054036
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF34ENSGALG00000004190Gallus gallus
 RNF34ENSG00000170633Homo sapiens
 Rnf34ENSMUSG00000029474Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf34a / ring finger protein 34a / RNF34* / Q969K3* / ring finger protein 34*ENSDARG0000003830066
rffl / ring finger and FYVE-like domain containing E3 ubiquitin protein ligase / Q6ZQM0* / Q8WZ73* / AC004223.3* / E3 ubiquitin-protein ligase rififylin *ENSDARG0000004283339
zgc:171740 / RFFL* / Q8WZ73* / Q6ZQM0* / AC004223.3* / E3 ubiquitin-protein ligase rififylin * / ring finger and FYVE like domain containing E3 ubiquitin protein ligase*ENSDARG0000005624430


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR003034  SAP domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TP53 Degradation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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