ENSDARG00000054814


Danio rerio

Features
Gene ID: ENSDARG00000054814
  
Biological name :si:ch211-251p5.5
  
Synonyms : si:ch211-251p5.5
  
Possible biological names infered from orthology : O75365 / Protein tyrosine phosphatase type IVA 3 / protein tyrosine phosphatase type IVA, member 3 / PTP4A3 / Q9D658
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 31453980
Gene end: 31505802
  
Corresponding Affymetrix probe sets: Dr.15382.1.A1_at (Zebrafish Array)   Dr.25415.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000114815
Ensembl peptide - ENSDARP00000118752
Ensembl peptide - ENSDARP00000151837
NCBI entrez gene - 567691     See in Manteia.
swissprot - E7FA22
swissprot - E9QDY5
ZFIN ID - ZDB-GENE-030131-2635
Ensembl - ENSDARG00000054814
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTP4A3ENSGALG00000040969Gallus gallus
 O75365ENSG00000184489Homo sapiens
 Ptp4a3ENSMUSG00000059895Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptp4a3 / protein tyrosine phosphatase type IVA, member 3 / O75365* / Q9D658* / Protein tyrosine phosphatase type IVA 3 *ENSDARG0000003999775
ptp4a1 / protein tyrosine phosphatase type IVA, member 1 / Q63739* / Q93096* / protein tyrosine phosphatase 4a1*ENSDARG0000000624266
ptp4a2a / protein tyrosine phosphatase type IVA, member 2a / PTP4A2* / O70274* / Q12974* / Protein tyrosine phosphatase type IVA 2 * / protein tyrosine phosphatase type IVA, member 2*ENSDARG0000008744362
ptp4a2b / protein tyrosine phosphatase type IVA, member 2b / PTP4A2* / O70274* / Q12974* / Protein tyrosine phosphatase type IVA 2 * / protein tyrosine phosphatase type IVA, member 2*ENSDARG0000003567661


Protein motifs (from Interpro)
Interpro ID Name
 IPR000340  Dual specificity phosphatase, catalytic domain
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 biological_processGO:0043542 endothelial cell migration IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IBA
 molecular_functionGO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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