ENSDARG00000056090


Danio rerio

Features
Gene ID: ENSDARG00000056090
  
Biological name :capza1b
  
Synonyms : capping protein (actin filament) muscle Z-line, alpha 1b / capza1b
  
Possible biological names infered from orthology : 4933400A11Rik / capping actin protein of muscle Z-line alpha subunit 1 / CAPZA1 / P52907 / RIKEN cDNA 4933400A11 gene
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 27807266
Gene end: 27827660
  
Corresponding Affymetrix probe sets: Dr.10440.1.A1_at (Zebrafish Array)   Dr.24463.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000072971
Ensembl peptide - ENSDARP00000133155
NCBI entrez gene - 474327     See in Manteia.
swissprot - A0A0R4IEP3
swissprot - Q6ZM50
ZFIN ID - ZDB-GENE-031002-24
Ensembl - ENSDARG00000056090
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CAPZA1ENSGALG00000001547Gallus gallus
 CAPZA1ENSG00000116489Homo sapiens
 4933400A11RikENSMUSG00000055357Mus musculus
 Capza1ENSMUSG00000070372Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
capza1a / capping protein (actin filament) muscle Z-line, alpha 1a / CAPZA1* / P52907* / capping actin protein of muscle Z-line alpha subunit 1*ENSDARG0000003424087


Protein motifs (from Interpro)
Interpro ID Name
 IPR002189  F-actin-capping protein subunit alpha
 IPR017865  F-actin capping protein, alpha subunit, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051016 barbed-end actin filament capping IEA
 biological_processGO:0051693 actin filament capping IEA
 cellular_componentGO:0008290 F-actin capping protein complex IEA
 molecular_functionGO:0003779 actin binding IEA


Pathways (from Reactome)
Pathway description
Advanced glycosylation endproduct receptor signaling
Factors involved in megakaryocyte development and platelet production


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000057598 s100b / S100 calcium binding protein, beta (neural) / P50114* / P04271* / S100 calcium binding protein B* / S100 protein, beta polypeptide, neural*  / complex / reaction
 ENSDARG00000100252 capzb / capping protein (actin filament) muscle Z-line, beta / P47756* / capping actin protein of muscle Z-line beta subunit*  / complex / reaction
 ENSDARG00000035924 dync1li2 / dynein, cytoplasmic 1, light intermediate chain 2 / O43237* / Q6PDL0* / Cytoplasmic dynein 1 light intermediate chain 2 *  / complex
 ENSDARG00000058454 dynll1 / dynein, light chain, LC8-type 1 / P63168* / P63167* / BC048507* / cDNA sequence BC048507* / Dynein light chain 1, cytoplasmic *  / complex
 ENSDARG00000041363 dctn3 / dynactin 3 (p22) / O75935* / Q9Z0Y1* / dynactin subunit 3*  / complex
 ENSDARG00000060948 dync1i1 / dynein, cytoplasmic 1, intermediate chain 1 / O14576* / O88485* / Cytoplasmic dynein 1 intermediate chain 1 *  / complex
 ENSDARG00000056753 dctn1b / dynactin 1b / DCTN1* / O08788* / Q14203* / dynactin subunit 1* / Mus musculus dynactin 1 (Dctn1), transcript variant 4, mRNA.*  / complex
 ENSDARG00000069790 dynll2a / dynein, light chain, LC8-type 2a / Q9D0M5* / DYNLL2* / Q96FJ2* / dynein light chain LC8-type 2* / Dynein light chain 2, cytoplasmic *  / complex
 ENSDARG00000019743 dctn1a / dynactin 1a / DCTN1* / Q14203* / dynactin subunit 1*  / complex
 ENSDARG00000098317 dync1li1 / dynein, cytoplasmic 1, light intermediate chain 1 / Q8R1Q8* / Q9Y6G9* / Cytoplasmic dynein 1 light intermediate chain 1 *  / complex






 

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