ENSDARG00000056328


Danio rerio

Features
Gene ID: ENSDARG00000056328
  
Biological name :rhot2
  
Synonyms : Q32LU1 / ras homolog family member T2 / rhot2
  
Possible biological names infered from orthology : Gm20683 / Q8IXI1 / Q8JZN7
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 37533728
Gene end: 37559496
  
Corresponding Affymetrix probe sets: Dr.15276.1.A1_at (Zebrafish Array)   Dr.17152.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000061202
NCBI entrez gene - 557574     See in Manteia.
swissprot - Q32LU1
ZFIN ID - ZDB-GENE-051120-96
Ensembl - ENSDARG00000056328
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RHOT2ENSGALG00000002497Gallus gallus
 RHOT2ENSG00000140983Homo sapiens
 Gm20683ENSMUSG00000093593Mus musculus
 Rhot2ENSMUSG00000025733Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6NVC5 / rhot1a / ras homolog family member T1a / RHOT1* / Q8IXI2* / Q8BG51* / ras homolog family member T1*ENSDARG0000009999661
rhot1b / ras homolog family member T1 / RHOT1* / Q8BG51* / Q8IXI2*ENSDARG0000010331360


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR002048  EF-hand domain
 IPR005225  Small GTP-binding protein domain
 IPR011992  EF-hand domain pair
 IPR013566  EF hand associated, type-1
 IPR013567  EF hand associated, type-2
 IPR018247  EF-Hand 1, calcium-binding site
 IPR020860  MIRO domain
 IPR021181  Mitochondrial Rho GTPase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007005 mitochondrion organization IEA
 biological_processGO:0019725 cellular homeostasis ISS
 biological_processGO:0047497 mitochondrion transport along microtubule ISS
 biological_processGO:0097345 mitochondrial outer membrane permeabilization ISS
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031307 integral component of mitochondrial outer membrane ISS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Rho GTPase cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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