ENSDARG00000056840


Danio rerio

Features
Gene ID: ENSDARG00000056840
  
Biological name :otud5b
  
Synonyms : otud5b / OTU deubiquitinase 5b
  
Possible biological names infered from orthology : OTUD5 / OTU deubiquitinase 5 / OTU domain-containing protein 5 / Q3U2S4 / Q96G74
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 25681335
Gene end: 25689873
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000105205
Ensembl peptide - ENSDARP00000152311
NCBI entrez gene - 445146     See in Manteia.
RefSeq - NM_001327765
RefSeq Peptide - NP_001314694
swissprot - F1QPN8
swissprot - Q6DC70
ZFIN ID - ZDB-GENE-040801-50
Ensembl - ENSDARG00000056840
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OTUD5ENSG00000068308Homo sapiens
 Otud5ENSMUSG00000031154Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q08BW0 / otud5a / OTU deubiquitinase 5a / OTUD5* / Q3U2S4* / Q96G74* / OTU deubiquitinase 5* / OTU domain-containing protein 5 *ENSDARG0000005900673
alg13 / ALG13, UDP-N-acetylglucosaminyltransferase subunit / Q9NP73*ENSDARG0000005437411
otud4 / OTU deubiquitinase 4 / B2RRE7* / Q01804* / OTU domain-containing protein 4 *ENSDARG0000007781011


Protein motifs (from Interpro)
Interpro ID Name
 IPR003323  OTU domain
 IPR031084  OTU domain-containing protein 5/Otubain-like deubiquitinase 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016579 protein deubiquitination IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000106 extension extension decreased thickness , abnormal
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 ZFA:0000155 somite somite fused with somite , abnormal
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 ZFA:0001094 whole organism whole organism decreased size , abnormal
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 ZFA:0001115 trunk trunk bent , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr