ENSDARG00000058579


Danio rerio

Features
Gene ID: ENSDARG00000058579
  
Biological name :si:ch211-274f20.2
  
Synonyms : si:ch211-274f20.2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 9009600
Gene end: 9028955
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122942
NCBI entrez gene - 100005358     See in Manteia.
RefSeq - XM_001344403
RefSeq - XM_021481115
swissprot - E9QJ85
ZFIN ID - ZDB-GENE-091204-91
Ensembl - ENSDARG00000058579
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
canx / calnexin / P27824* / P35564*ENSDARG0000003748841
clgn / calmegin / O14967* / P52194* / Mus musculus calmegin (Clgn), transcript variant 2, mRNA.*ENSDARG0000000931540
calr / calreticulin / P14211* / P27797*ENSDARG0000007629020
calr3b / calreticulin 3bENSDARG0000010280819
calr3a / calreticulin 3aENSDARG0000010397919


Protein motifs (from Interpro)
Interpro ID Name
 IPR001580  Calreticulin/calnexin
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006457 protein folding IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0051082 unfolded protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr